Pairwise Alignments

Query, 383 a.a., dual-specificity RNA methyltransferase RlmN from Burkholderia phytofirmans PsJN

Subject, 390 a.a., 50S rRNA methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  556 bits (1432), Expect = e-163
 Identities = 276/373 (73%), Positives = 315/373 (84%), Gaps = 10/373 (2%)

Query: 8   NLLDLDAQGLVAYCDSLGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATIS 67
           NLLD+D   LVAYC  LGEKPFRAKQLQRWIHQ+  ADFD MTDLAKSLR+KLK RA + 
Sbjct: 7   NLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVADFDQMTDLAKSLRDKLKTRAEVR 66

Query: 68  MPGIVSDNISTDGTRKWLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQ 127
            P I+SD+ STDGTRKWL+DVG  NAVETV+IPEE RGTLCVS+QAGCAVNCRFCSTGKQ
Sbjct: 67  APAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQ 126

Query: 128 GFSRNLTTAEIIGQLRMAEFALRASRGIDGGRATGGDGKGERVVTNVVMMGMGEPLLNYD 187
           GF+RNL+ AEIIGQL MAEF LR ++GI+GG       KGER +TNVVMMGMGEPLLN++
Sbjct: 127 GFNRNLSVAEIIGQLWMAEFELRKTKGIEGG------PKGERQITNVVMMGMGEPLLNFE 180

Query: 188 AVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLV 247
             V A+RLMLDDNAYGLSRRRVTLSTSGVVPM+ +L  + PVALAVSLHA +D LRD L+
Sbjct: 181 PTVTALRLMLDDNAYGLSRRRVTLSTSGVVPMIGKLSQECPVALAVSLHASNDALRDSLI 240

Query: 248 PLNKKYPLRELMAACQRYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPC 303
           PLN+K+PLRELM AC+RYL+ APRDFITFEYCMLDGVND++  AREL+AL ++    +PC
Sbjct: 241 PLNRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPC 300

Query: 304 KFNLIPFNPFPESGLIRSKPEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363
           KFNLIPFNPFPESGL RS   +IK FAQ+LMDAG+VTT+RKTRGDDIDAACGQLAG VKD
Sbjct: 301 KFNLIPFNPFPESGLKRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360

Query: 364 RTRLAERTGKAAK 376
           RTR+ ER  K A+
Sbjct: 361 RTRVQERMQKMAE 373