Pairwise Alignments

Query, 383 a.a., dual-specificity RNA methyltransferase RlmN from Burkholderia phytofirmans PsJN

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  396 bits (1018), Expect = e-115
 Identities = 212/371 (57%), Positives = 261/371 (70%), Gaps = 14/371 (3%)

Query: 3   SSPTVNLLDLDAQGLVAYCDSLGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKG 62
           S   +NLLDLD + + A    LGEKPFRA QL +WI+ +  +DF+ MT++ K LR+KL  
Sbjct: 2   SEKKINLLDLDRKAMRALFADLGEKPFRADQLMKWIYHFGVSDFEEMTNINKVLRQKLAA 61

Query: 63  RATISMPGIVSDNISTDGTRKWLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFC 122
           R  I  P I S   STDGT K+ I VG    VETVYIPE+ R TLCVSSQ GCA+ C FC
Sbjct: 62  RCEIVAPEISSYQKSTDGTIKFAIHVGEGQEVETVYIPEDDRATLCVSSQVGCALECTFC 121

Query: 123 STGKQGFSRNLTTAEIIGQLRMAEFALRASRGIDGGRATGGDGKGERVVTNVVMMGMGEP 182
           ST +QGF+RNLT +EI+GQ+       R S  +   + T     GER +TNVVMMGMGEP
Sbjct: 122 STAQQGFNRNLTVSEIVGQI------WRVSHFLGFAKET-----GERPITNVVMMGMGEP 170

Query: 183 LLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPL 242
           LLN   V+PAM +MLDD  + LS+RRVTLSTSGVVP +D+LG  L VALAVS+HAP+D L
Sbjct: 171 LLNLANVIPAMDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDALDVALAVSIHAPNDEL 230

Query: 243 RDMLVPLNKKYPLRELMAACQRYL--KVAPRDFITFEYCMLDGVNDSEAQARELLALTRD 300
           RD+LVP+NKKYPL+E +A  +RY+    A R  +T EY MLD +NDS  QA EL  L +D
Sbjct: 231 RDILVPVNKKYPLQEFLAGIRRYIAKSNANRGRVTVEYVMLDHINDSTEQAHELAQLMKD 290

Query: 301 VPCKFNLIPFNPFPESGLIRSKPEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGA 360
            PCK NLIPFNP+P S   RS   +I RF++VLM+ G+   VRKTRGDDIDAACGQLAG 
Sbjct: 291 TPCKVNLIPFNPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGD 350

Query: 361 VKDRT-RLAER 370
           ++DRT RLA++
Sbjct: 351 IRDRTKRLAKK 361