Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Burkholderia phytofirmans PsJN

Subject, 480 a.a., DNA repair protein RadA (DNA repair protein SMS) from Mycobacterium tuberculosis H37Rv

 Score =  368 bits (944), Expect = e-106
 Identities = 197/453 (43%), Positives = 285/453 (62%), Gaps = 7/453 (1%)

Query: 1   MAKPKTLYICSECGGQSPKWAGQCPSCNAWNTLVE-SVAEAPSTHRFQALAKSAPVRRLA 59
           +A  ++ Y CSEC   S KW G+C  C  W T+ E +V  A    R +++A ++    ++
Sbjct: 1   VANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRSVAPASGAVPIS 60

Query: 60  DIEASDVPRFSTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIA-ADKRAL 118
            ++A       TG+ E DRVLGGG+VPG V L+ GDPG+GKSTLLL+     A + +RAL
Sbjct: 61  AVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRAL 120

Query: 119 YISGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATISEQRPDVAVIDSIQT 178
           Y+SGEESA QI LRA R+     G++  E+ L A+  +  +   I   +P + ++DS+QT
Sbjct: 121 YVSGEESAGQIRLRADRIGC---GTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQT 177

Query: 179 VYSDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEHIVDTVL 238
           + +       G V QVR   A LT  AK +   +I+VGHVTK+GA+AGPR LEH+VD VL
Sbjct: 178 MSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDGAIAGPRSLEHLVDVVL 237

Query: 239 YFEGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVPGSCVL 298
           +FEGD + + R+VR +KNRFGA +E+G F + + G+ G+ +PS LFL Q    V G+ + 
Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297

Query: 299 VTQEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLN 358
           VT +G RPL+ EVQAL+ +    +PRR   G+ Q R AM+ AVL +HA +A    D++L+
Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357

Query: 359 AVGGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQERLKEAAK 418
            VGG+++TEP+ADLAV +A+ S+  N PLP   V+ GEVGLAG+IR       RL EAA+
Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417

Query: 419 LGFSVAVIPKANAPKQPIEGLQVVAVERIEQAI 451
            GF++A++P ++ P  P  G+  +    I  A+
Sbjct: 418 QGFTIALVPPSDDPVPP--GMHALRASTIVAAL 448