Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Burkholderia phytofirmans PsJN

Subject, 456 a.a., DNA repair protein RadA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  340 bits (873), Expect = 4e-98
 Identities = 188/431 (43%), Positives = 262/431 (60%), Gaps = 9/431 (2%)

Query: 1   MAKPKTLYICSECGGQSPKWAGQCPSCNAWNTL--VESVAEAPSTHRFQALAKSAPVRRL 58
           MAK +  Y+CS CG  +P+W GQCP+C AWNTL  V    E  S  R Q    S   R L
Sbjct: 1   MAKVRETYVCSACGANTPQWRGQCPTCKAWNTLDAVTVARETRSGVRRQGAPDSVRPRPL 60

Query: 59  ADIEASDVPRFSTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIAADKR-A 117
            D+       F TG+   DRVLG GLVPG  +L GG+PGIGKSTLLLQ    +AA  R  
Sbjct: 61  RDVSDEGGSPFGTGLEALDRVLGSGLVPGAAILFGGEPGIGKSTLLLQVAGAVAASGRDV 120

Query: 118 LYISGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATI-SEQRPDVAVIDSI 176
           LY+SGEES  Q+  RA+RL +L        L  +A  ++E + + + S   P + V+DS+
Sbjct: 121 LYLSGEESLTQLKGRAERLGVLH-----ERLLAVATSRVEDVFSVLESGTPPALLVLDSV 175

Query: 177 QTVYSDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEHIVDT 236
           QT+ SD     PG+V+QVR  A ++    K++GT +++VGHVTK+G LAGPR+LEH+VDT
Sbjct: 176 QTLTSDLAEGLPGNVSQVRAVATEVVDRCKRAGTAVLLVGHVTKDGNLAGPRLLEHMVDT 235

Query: 237 VLYFEGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVPGSC 296
           V+  EGD    +RL+R +KNRFG   EL VF M +RGL  V +PS  FL   + ++ G+ 
Sbjct: 236 VVSLEGDRRQMFRLLRVLKNRFGPNQELLVFQMAQRGLEVVEDPSTFFLGARDPALSGTA 295

Query: 297 VLVTQEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVF 356
           V++  +G RP  VEVQALV  +    PRR  +G + NRL +LLAVL +   +     D++
Sbjct: 296 VVMAVDGQRPFAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIY 355

Query: 357 LNAVGGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQERLKEA 416
               GG+++ +P  DLA++ A+ SS  +  LP+  V++GEV L G++RP      RL +A
Sbjct: 356 AKIGGGMRLQDPGMDLALVAAVLSSFYDVALPERAVLWGEVDLNGQVRPVAAHDIRLGQA 415

Query: 417 AKLGFSVAVIP 427
           A+LG+   + P
Sbjct: 416 ARLGYGPVLHP 426