Pairwise Alignments

Query, 405 a.a., succinyldiaminopimelate aminotransferase from Burkholderia phytofirmans PsJN

Subject, 389 a.a., LL-diaminopimelate aminotransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  161 bits (407), Expect = 4e-44
 Identities = 113/398 (28%), Positives = 191/398 (47%), Gaps = 23/398 (5%)

Query: 5   LDSLQPYPFEKLRALFADVTPSAGLAHISFGIGEPKHPTPELIRDAVVASLGGLSS--YP 62
           L +L PY F  +  + A+V  + G+  IS GIG+P  PTP+ I +A+  ++   ++  YP
Sbjct: 10  LATLPPYLFAGIDKVKAEVA-ARGVDIISLGIGDPDMPTPDFIIEAMKKAVERPANHQYP 68

Query: 63  ATIGSPALRESIAKWVTRRYNLPPVDPATQVLPVSGSREALFALAQTVLDPKKNADGEPA 122
           + +G    R+ +A W  RR+ +  +DP T+V+ + GS+E +       ++P     G+  
Sbjct: 69  SYVGMLEFRQEVANWYGRRFGVS-LDPKTEVIGLIGSKEGIAHFPLAFVNP-----GDLV 122

Query: 123 IVLCPNPFYQIYEGAAILAGAQPYFVNSDPARNFACDYSAVPADIWARTQLLYVCSPGNP 182
           +V  PN  Y +Y  A    G +  F+      ++  D  A+PA  W R ++++V  P NP
Sbjct: 123 LVCTPN--YPVYHIATGFVGGEVQFIPLVEENDYLPDLDAIPAATWDRAKMIFVNYPNNP 180

Query: 183 TGAVLTLDDWRELFALSDRYGFVIASDECYSEIYFDEANPPLGGLEAAHKLGRGFERLVM 242
           T A      + +L  +  ++  +IA D  Y+E+Y+DE + P+  LE    +    +  + 
Sbjct: 181 TAATAPRAFYEKLIGICRKHNVIIAHDTAYTEVYYDENDKPMSILE----VEGAKDVTIE 236

Query: 243 LSSLSKRSNVPGMRSGFVAGDAAILKDFLLYRTYHGAALSTVFQSASIVAWND-ETHVRE 301
             SLSK  N+ G R G   G+A+++      +    + +    Q ASIVA  D +   RE
Sbjct: 237 FHSLSKTYNMTGWRVGMAVGNASLVAGLGKVKENVDSGIFQAVQEASIVALRDGDDFCRE 296

Query: 302 NRAKYVQKFSTVTPMLAEV-LDVRLPDAAFYLWADVSRTGLTDTEFAQRLYADYNVTVLP 360
            R  Y ++   V   L +V +  R+P AAFY+WA V     +  EF   +     V + P
Sbjct: 297 LRGIYRKRRDVVVAALNKVGIACRVPTAAFYIWAKVPAGYGSSAEFVTAVLEKTGVVLTP 356

Query: 361 GSFLARTAHGVNPGRNFVRMALVAGVDECTQGAQRIVD 398
           G+          PG  + R++L    D   +   RI +
Sbjct: 357 GNGFG------TPGEGYFRISLTVDTDRLEEAVSRIAN 388