Pairwise Alignments

Query, 688 a.a., DNA ligase from Burkholderia phytofirmans PsJN

Subject, 808 a.a., DNA ligase, NAD-dependent (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  558 bits (1437), Expect = e-163
 Identities = 319/699 (45%), Positives = 429/699 (61%), Gaps = 35/699 (5%)

Query: 15  AERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQRVGG 74
           A RA  LR +L   ++ YYVLD  ++ DAEYD LF+EL+ IE E P L  PDSPT RVG 
Sbjct: 34  AARAEALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGD 93

Query: 75  EAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPVDYAAELKFDGL 134
              +  E   H   M SL+N F+ E+   F +R+  A      EP  P  +  + K DGL
Sbjct: 94  TVVAALETQAHTLRMYSLDNAFSAEEWDGFIQRMLRA------EPDAPTAFWCDPKMDGL 147

Query: 135 AISLRYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRV-PHVLDVRGEVLMFK 193
           A+ + Y +G F  A TRGDG  GE VT  +RT+R++PL+L G+   P  L+VRGEV++ +
Sbjct: 148 ALEVIYENGVFTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITR 207

Query: 194 RDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVL-------- 245
            +F+ LN  +R A +K FANPRNAAAGS+RQLD+ +TA RPL F AYG+G +        
Sbjct: 208 AEFDALNAARRGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSD 267

Query: 246 ------EGMEMP-ATHSELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYD 298
                 +G E   ATH +++    + G     +    +    ++ ++  +G +R +LP+D
Sbjct: 268 GAASAAQGPEARWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFD 327

Query: 299 IDGVVYKVNRRDEQDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARL 358
           IDGVV K++    Q ALG+ +RAPR+A+A KFPA +A T+L  I +QVGRTG +TPVA L
Sbjct: 328 IDGVVAKLDDLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAEL 387

Query: 359 EPVFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRP-SDAREF 417
            PV VGG TV+ ATLHNEDE+R KD+R+GD V+V+RAGDVIPEVV  L+D+RP S   EF
Sbjct: 388 APVAVGGVTVSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEF 447

Query: 418 VMPTQCPVCGSSIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQL 477
             P +CPVC + + R P EA  RC   + CPA  +Q++ HF  +  LDI G+G + ++ L
Sbjct: 448 EFPAECPVCHTPVRREPGEAAWRCV-NVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELL 506

Query: 478 VEQNLVRTPADLFNIGFATLAELDRFAEKSAQNLLDSLEKAK-HTTLARFIYALGIRHVG 536
           V++  V +PADLF +   TL   +R   K A+N + + + A+   TL R I ALGIRHVG
Sbjct: 507 VDRGKVTSPADLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVG 566

Query: 537 ESTAKDLAKHFGSLDPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGK 596
           E TA+ LA HF  LD +  A  E L ++ D+GP VA SI  FFA E NR ++E+LR  G 
Sbjct: 567 EQTARTLAAHFADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVG- 625

Query: 597 VTWPEGPPAPKAP--------QGVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVS 648
             WP  P  P+A          G LAG  V+ TG+L +L R +A+    AAGA + GSVS
Sbjct: 626 -LWPVRPVRPEADAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVS 684

Query: 649 KKTDYLVAGADAGSKLAKAEELGVPVLDEDGMRKLLEGQ 687
           KK D LV G   GSKL KA +LG+ VL E     LLEG+
Sbjct: 685 KKLDLLVVGDKPGSKLDKATKLGIRVLREQEFLDLLEGR 723