Pairwise Alignments

Query, 688 a.a., DNA ligase from Burkholderia phytofirmans PsJN

Subject, 741 a.a., DNA ligase, NAD-dependent (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  554 bits (1428), Expect = e-162
 Identities = 326/703 (46%), Positives = 419/703 (59%), Gaps = 44/703 (6%)

Query: 12  SAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQR 71
           +A  +  A L   L RAN  Y+  D P L DA+YD L +   +IE   PDL   DSP+ +
Sbjct: 48  AAARKELARLSELLARANAEYHRDDAPSLSDADYDALKQRNAAIEARFPDLKRGDSPSDQ 107

Query: 72  VGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPVDYAAELKF 131
           VG   +  F  V H   MLSL N F+DEDI  FD R+   LG        P+ Y AE K 
Sbjct: 108 VGAAPSDTFSKVTHAVRMLSLANAFSDEDIRDFDTRIRRFLGLAED---APLAYTAEPKI 164

Query: 132 DGLAISLRYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVPHVLDVRGEVLM 191
           DGL++SLRY  G  VQA+TRGDG  GENVT N RTI  IP +L G   P VL+VRGEV M
Sbjct: 165 DGLSLSLRYEHGTLVQAATRGDGAVGENVTANARTIDDIPHRLDG--APEVLEVRGEVYM 222

Query: 192 FKRDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLEGMEMP 251
              DF  LN RQ     K FANPRNAAAGSLRQLD++IT  RPL FFAY  G +    + 
Sbjct: 223 SHADFAELNARQAETGGKTFANPRNAAAGSLRQLDAEITRARPLKFFAYAWGEISA-PLA 281

Query: 252 ATHSELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYDIDGVVYKVNRRDE 311
            T +E L  ++E G  +N      +  E +L  +  +  +R  L YDIDGVVYK++  D 
Sbjct: 282 ETQTETLARFREFGFTINPLTVRCETPEDMLAQYRAIEAQRATLGYDIDGVVYKLDDLDL 341

Query: 312 QDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATVTNA 371
           Q  LGF S  PR+A+AHKFPA+ A T+L AID+QVGRTGA++PVARL PV VGG  V+NA
Sbjct: 342 QRRLGFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLAPVTVGGVVVSNA 401

Query: 372 TLHNEDEVRRK-----------DIRIGDTVIVRRAGDVIPEVVSALLDRRPSDAREFVMP 420
           TLHNED ++ +           DIR+GD V V RAGDVIP++    L RRP  A  F  P
Sbjct: 402 TLHNEDYIQGRDNTGAPIRWGTDIRVGDWVQVYRAGDVIPKIRDVDLSRRPEGAAPFDFP 461

Query: 421 TQCPVCGSSIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ 480
           T CP CGS   R P +A+ RC+GGL CPAQ  + L HF  R ALDIDGLG K ++Q    
Sbjct: 462 TTCPECGSDAPREPGDAVRRCSGGLICPAQAVEKLKHFVSRGALDIDGLGAKQVEQFYRD 521

Query: 481 NLVRTPADLFNI------GFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRH 534
             +  PAD+F +      G   L   + + +KSA+NL  +++ A+    A+ ++ LGIRH
Sbjct: 522 GWIAEPADIFTLRARFGQGLQQLKNREGWGDKSAENLFRAIDTARTAPFAKVLFGLGIRH 581

Query: 535 VGESTAKDLAKHFGSLDPIM---DASVEA-------LLEVNDVGPVVAESIHQFFAEEHN 584
           +GES +  LA H+ +++ ++   DA+V+        LL ++ VG V+A ++     +E  
Sbjct: 582 IGESASSLLANHYLTMEALLAAVDAAVDETSDAWADLLNIDGVGEVMARALVTTLTQEAE 641

Query: 585 RTVIEQLRAPGKVTWPEGPPAPKAPQGV----LAGKTVVLTGTLPSLAREEAKEMLEAAG 640
           R  + +L A       +  PAP  P  V    +AGKT+V TGTL +++R EAK   EA G
Sbjct: 642 RASVNRLLA-------QIDPAPATPPQVGDSPVAGKTLVFTGTLETMSRAEAKATAEALG 694

Query: 641 AKVAGSVSKKTDYLVAGADAGSKLAKAEELGVPVLDEDGMRKL 683
           AKVAGSVS KTD L+AG  AGSK  KAE LG+ V+DED  R L
Sbjct: 695 AKVAGSVSAKTDLLIAGPGAGSKATKAEALGIEVIDEDAWRVL 737