Pairwise Alignments

Query, 688 a.a., DNA ligase from Burkholderia phytofirmans PsJN

Subject, 691 a.a., DNA ligase, NAD-dependent (RefSeq) from Shewanella sp. ANA-3

 Score =  703 bits (1815), Expect = 0.0
 Identities = 370/683 (54%), Positives = 479/683 (70%), Gaps = 14/683 (2%)

Query: 4   TSASHPATSAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLI 63
           + A  P  + P  +A  L   L   N  YYV D P + D+EYD+L + L+ +E E+P  +
Sbjct: 17  SQAVTPHNAQPIMQA--LCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFV 74

Query: 64  VPDSPTQRVGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPV 123
             DSPTQRVGG A + FE + H +PMLSL+N F + D  AF KRV D +G+        V
Sbjct: 75  AADSPTQRVGGMALAKFEQITHLKPMLSLDNAFDEADFSAFHKRVSDRVGE--------V 126

Query: 124 DYAAELKFDGLAISLRYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVPHVL 183
            +  E K DGLA+S+ Y +G   +A+TRGDGT GE++TENV+TI+SIPLKL+G   P ++
Sbjct: 127 SFCCEPKLDGLAVSILYRNGVLERAATRGDGTVGEDITENVKTIKSIPLKLRGDNYPELV 186

Query: 184 DVRGEVLMFKRDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIG 243
           +VRGE  M K  FE LNER R  ++K F NPRNAAAGSLRQLDSKITA R LSF+AY +G
Sbjct: 187 EVRGEAFMPKAAFEALNERARLKDEKLFVNPRNAAAGSLRQLDSKITASRALSFYAYALG 246

Query: 244 VLE--GMEMPATHSELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYDIDG 301
           V+E    E+  TH E L   K  GLPV+SE  V      +  ++  +  +R  LP++IDG
Sbjct: 247 VVEPTSHELAKTHYEQLQQLKSWGLPVSSEIKVCDELSQVFAYYQDILTRRADLPFEIDG 306

Query: 302 VVYKVNRRDEQDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPV 361
           VV KVN   +Q  LGFV+++PR+A+A+KFPAQE +T L  +D QVGRTGA+TPVARL+PV
Sbjct: 307 VVMKVNDIAQQQTLGFVAKSPRWAIAYKFPAQEEMTLLEGVDFQVGRTGAVTPVARLKPV 366

Query: 362 FVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPSDAREFVMPT 421
           FVGG TV+NATLHN DE+ R  + +GDTVI+RRAGDVIP++V+ + +RRP DA+    P 
Sbjct: 367 FVGGVTVSNATLHNADEIARLGVMVGDTVIIRRAGDVIPQIVAIVPERRPEDAKAIAFPQ 426

Query: 422 QCPVCGSSIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQN 481
            CPVCGS +ERL  EA+ARC+GGLFC AQRK+A+ HFA R+ALDIDG+G+KI++QL+++ 
Sbjct: 427 HCPVCGSLVERLEGEAVARCSGGLFCEAQRKEAIKHFASRKALDIDGMGDKIVEQLIDKE 486

Query: 482 LVRTPADLFNIGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTAK 541
           LV++PADLF +  + +  LDR   KSA NL  ++E AK TTL RF+YALGIR VGE+TA 
Sbjct: 487 LVQSPADLFKLTASMMTMLDRMGIKSATNLALAIEAAKTTTLPRFLYALGIREVGETTAA 546

Query: 542 DLAKHFGSLDPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGKVTWPE 601
           +LA HFGSL+ +  A++E L++V D+G VVA+ +  FFA+ HN  VI+ L A G V WP 
Sbjct: 547 NLATHFGSLEALRVATIEQLIQVEDIGEVVAQHVAHFFAQPHNLEVIDALIAAG-VNWP- 604

Query: 602 GPPAPKAPQGVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKTDYLVAGADAG 661
              AP A +  L G+T VLTGTL  L R +AK  L+A GAKVAGSVSK TD LVAG  AG
Sbjct: 605 AIAAPSADEQPLKGQTWVLTGTLNQLNRNDAKAQLQALGAKVAGSVSKNTDCLVAGEAAG 664

Query: 662 SKLAKAEELGVPVLDEDGMRKLL 684
           SKLAKA+ELGV V+ ED +  LL
Sbjct: 665 SKLAKAQELGVKVIGEDELLALL 687