Pairwise Alignments

Query, 305 a.a., ribonuclease from Burkholderia phytofirmans PsJN

Subject, 470 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)

Query: 21  VMKDAVERFSSDRCAMMGASIGFYSAFSLAPTLLIVLAITGWF----VGRDIAQGRFFGQ 76
           +++ A  R   DR   +  S+ F +  SL P L I LA+   F      R   +  F   
Sbjct: 22  LLRFAGRRLREDRLPQVAGSLTFTTILSLVPMLTIALALFTAFPLFSTFRASLEAYF--- 78

Query: 77  IRQLLGNDAATAMQAVVEHAHRSNGSGMAAAFSVVLLLVGASATFSCLNTALDVVFAAKS 136
           +  L+    A  +   +     +  + ++A   VVL+L     T S + +  + ++  K 
Sbjct: 79  VENLMPKGVANTILGYLNQ-FAAKSARISAVGGVVLILTSV-LTMSTIESVFNQIWRVKK 136

Query: 137 PKGLAGLAWVIRARLVSLGLLMGLSFLLVVSLVLDAALQTA-GSAVFGNSTLSVVADVAQ 195
            + L     V  A +++LG L     L+ VS+ + + L TA G AV    +L  +     
Sbjct: 137 SRPLVQRVLVYWA-IITLGPL-----LIGVSISVTSYLSTATGGAV---KSLPWLGASFY 187

Query: 196 SVFGLVILTFGLGALIKWLPDKRVNFRSALIGGAVAALLFTVGRHLFGFYLAHAGT-AGA 254
           ++  L+  T     L   +P++ V++R AL GG +A +   + + LF  Y+    T    
Sbjct: 188 TLVSLMFSTLAYTLLYSTVPNQTVDWRDALAGGLLAGIGLEIAKRLFAVYILKFPTYTMV 247

Query: 255 FGAAGSLAVLMMWLYFCAIVFLFGAEVTASL 285
           +G    L + ++W+Y   ++ LFGA +TA+L
Sbjct: 248 YGTVAVLPIFLVWIYMMWMITLFGALLTAAL 278