Pairwise Alignments

Query, 511 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 457 a.a., TolC family protein from Escherichia coli Nissle 1917

 Score =  147 bits (371), Expect = 8e-40
 Identities = 134/462 (29%), Positives = 207/462 (44%), Gaps = 31/462 (6%)

Query: 23  AAC-SFGPSGEPPAMPQPAHY-GAQAQPTQTVPAQGVTQQFVVGAKPVPEWWKLYRSDAL 80
           A C S  P    P  P PA   GAQ Q                G     +W ++     L
Sbjct: 14  AGCVSLDPHYSTPESPIPATLPGAQGQ----------------GKAISHDWQQVIHDPRL 57

Query: 81  NALVDEGLRNSPTLAATDKSLAAAREQLRAQIGSSMLPTVDLGGQATRNRALAIPEAGPN 140
             +V   L  +  +      + +AR  L  Q  +S+ PTV+    +TR+R+LA    G  
Sbjct: 58  QQVVTIALNRNRDVQKAIADIDSARA-LYGQTNASLFPTVNAALSSTRSRSLA---NGTG 113

Query: 141 TFLYNIFVGQLQAHYTFDLFGAARLADAALAARVNVQAYQFDA--ARRALAANIVTAAIT 198
           T           + YT DLFG  R    + AAR    A +F A   R  L A I TA +T
Sbjct: 114 T---TAEADGTVSSYTLDLFG--RNQSLSRAARETWLASEFTAQNTRLTLIAEISTAWLT 168

Query: 199 SAALHAQIETTERLVTIANDQARDTQRRYALGAVSHADQLSAQQSAASLSASLPGLKQQW 258
            AA ++ +   +  +  A +  +  QR+  +G  +  D   A        AS+   + Q 
Sbjct: 169 LAADNSNLALAKETMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQV 228

Query: 259 LSTRHALAVLLGRT--PDAAPDDLELAQLRVPEQVPVVVPSELLRARPDIQAADAALKAA 316
           +  ++AL +L G T   +  P  LE    ++   VP  V S++L  RPDIQ A+  LK+A
Sbjct: 229 MQDKNALNLLAGTTLAENLLPGTLESLPEQMISLVPAGVSSDVLLRRPDIQEAEHNLKSA 288

Query: 317 AADVGVATAQMFPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHGGALFAQRR 376
            AD+G A A  FP++SL+AS G G  +     S    IWS   S++ PLF GG+  AQ R
Sbjct: 289 NADIGAARANFFPTISLTASAGVGSDALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLR 348

Query: 377 AAVDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQALDAANIAARSAQGIFDETSGRYR 436
            A       ++ Y++ V +AF++VA+ LA      + LDA     ++ Q   D    RY+
Sbjct: 349 YAEAQKRGLIATYEKNVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQ 408

Query: 437 LGALPIASARSSEQQFRNAQLDEIRYTSARLTDTAALFQAMG 478
            G     +  ++++   +AQ + +       T+   L+Q++G
Sbjct: 409 AGVGDYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLG 450