Pairwise Alignments

Query, 577 a.a., voltage-gated chloride channel protein ClcB from Burkholderia phytofirmans PsJN

Subject, 899 a.a., chloride channel protein from Synechocystis sp000284455 PCC 6803

 Score =  158 bits (399), Expect = 1e-42
 Identities = 135/571 (23%), Positives = 250/571 (43%), Gaps = 51/571 (8%)

Query: 20  DAHTMLIWSVVVGVAGAFATIAFREAIALLQFAIVGKSGSFVEMARGLPWTVRIWLPAAG 79
           D+   +  + V+G   A A +  +  +  L     G S   +    G  W +  +    G
Sbjct: 25  DSRYAIAEACVIGFVSALAALVIKNGVNWL-----GSSRLSLADTYGAIWVLPCFGLVFG 79

Query: 80  GLIAGFLLLIARRYEDKCNHIDYMEAVAIGDGVVPVKLSM--------WRS-----VSSL 126
           GL AG L             I+     A G G+  VK ++        WR      + ++
Sbjct: 80  GL-AGAL-------------IEQFSRPAGGGGIPQVKAALARYPIPLDWRVAVVKLLGTV 125

Query: 127 FTISSGGSIGREGPMVQLAALAGSLIGRWVHFDPPRLRLLVACGAAAGITSAYSAPIAGA 186
             +  G ++GR  P V + A   + + RW    P   R ++A GAAAG+ + ++ PIAG 
Sbjct: 126 LVLGGGMTLGRRAPTVHIGAALAAQLSRWFPTSPEHRRQMIAAGAAAGLAAGFTTPIAGV 185

Query: 187 FFVTEIVLGSIAMESFGPVVVSAVVANITMREF--AGYKPPYEMPVFPPVAGL--EVLLF 242
            FV E ++  ++  +    +V++ V  +T   F  +     + +   P V     E+  +
Sbjct: 186 LFVVEELMRDVSSLTLETAIVASFVGAVTSLVFQSSDLNLAHSLSNSPTVRFTTGEIPFY 245

Query: 243 VALGALCGAAAPQFLRLLDLSKQSF-RKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYS 301
           + LG L G       R + LS Q++ RK  + L +R+ + GL+ G+     P  + +   
Sbjct: 246 LLLGILAGILGVLLNRSI-LSLQNWQRKQNLSLVIRIGVVGLISGVAIALLPSFFRDNAG 304

Query: 302 VVNAILHSPWTWTALVLVLVFKIVATAATAGSGAVGGVFTPTLFVGAVVGSLFGQGMHAL 361
           +   +     +W  +VL LV   + T     + A GG+F P L +G+ +G L G+   + 
Sbjct: 305 LREFVTSGELSWHQVVLTLVAHFILTILAYSTDAPGGLFAPALVMGSALGYLVGE-FGSY 363

Query: 362 WPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRA 421
           W    +    +A+ GMGAF     + P+ AI+++FE+T ++ VVLPLM++C  +Y V+ +
Sbjct: 364 WQDQVTQT-TFALAGMGAFFTSVVRVPVTAIIIVFELTGNFNVVLPLMVACATSYLVAES 422

Query: 422 IGKNSMYEITLRRN-----HEEQERSRLRATQMRELIRPAETVVPPNATVHDMTRVFLEY 476
           +   S+Y+  L         E+ +   L   +  ++++     +  + T+  +  +    
Sbjct: 423 LFPRSLYDHLLETKGIFLAEEKPDHDFLADIRAGQVMKTEVESLEQSLTLAQVLPIMSNS 482

Query: 477 PVKYLYVANESGAFLGVVALKDITSDLLDGSDTSAKTAANYLQPHFDVLTPDMPLGVALQ 536
             +   V  + G  +GV    D+ +   +    + K     + P+   + P+ PL   L 
Sbjct: 483 HHRGFPVV-QGGKLVGVFTQTDLANAAQESVHIALK---QIMTPNPITVDPEAPLSDVLY 538

Query: 537 HFLAFQGERLPVVESAAHPTLAGVVYKTSLL 567
               +Q  RLPVVE      L G++ +T ++
Sbjct: 539 LLNRYQLSRLPVVE--GDNKLVGIITRTDII 567