Pairwise Alignments

Query, 577 a.a., voltage-gated chloride channel protein ClcB from Burkholderia phytofirmans PsJN

Subject, 562 a.a., Chloride channel core (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  212 bits (539), Expect = 4e-59
 Identities = 131/435 (30%), Positives = 222/435 (51%), Gaps = 9/435 (2%)

Query: 11  RAQNLFRLSDAHTMLIW--SVVVGVAGAFATIAFREAIALLQFAIVGKSG--SFVEMARG 66
           RA    R      +  W  ++ VG+A  FA + FR+ I  LQ    G     + ++ A G
Sbjct: 22  RASVTIRRQGPSQIQFWFIALAVGIAAGFAALIFRKGIHWLQTMAYGHEDVRAVIDHAAG 81

Query: 67  LPWTVRIWLPAAGGLIAGFLLLIARRYEDKCNHIDYMEAVAIGDGVVPVKLSMWRSVSSL 126
           LPW   + +P  GGL+ G +L          +  D +E  A+ +G V  +  +  +V+S 
Sbjct: 82  LPWYWLVIVPTLGGLVVGLILHFFTDDGRVRSVADVIEGSALYEGRVEKRAGIASAVASW 141

Query: 127 FTISSGGSIGREGPMVQLAALAGSLIGRWVHFDPPRLRLLVACGAAAGITSAYSAPIAGA 186
            T+S+GGS GREGP+V LAA+  S +   +H D    R L+ C  AA ++++++APIAGA
Sbjct: 142 ITLSTGGSSGREGPVVHLAAVISSWVSNRIHADGITGRDLLGCAVAAAVSASFNAPIAGA 201

Query: 187 FFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYKPPYEMPVFPPVAG-LEVLLFVAL 245
            F  E+VL   A+ +F P+V+++    +  R   G    + +P    +A  +E+  F+ L
Sbjct: 202 LFALEVVLRHFAVHAFAPIVIASAAGTVINRLEFGDVTEFSLPEANALAFYVELPAFLLL 261

Query: 246 GALCGAAAPQFLRLL----DLSKQSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYS 301
           G +CG  A   ++ +    D +    +   +P  +R A  G+++G+L++W P + G GY 
Sbjct: 262 GLVCGLVAIVLMKSVFWTEDFANHLQKVTGLPRYLRPAFAGVLLGLLAIWFPHIIGVGYE 321

Query: 302 VVNAILHSPWTWTALVLVLVFKIVATAATAGSGAVGGVFTPTLFVGAVVGSLFGQGMHAL 361
                L S       ++  + K+VA A T G    GG+F+P+L VGA+ G  FG     +
Sbjct: 322 TTTNALTSQLLLHEAIVFAILKVVAVAITIGGRMGGGIFSPSLMVGALTGLAFGMIATGV 381

Query: 362 WPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRA 421
           +P  + +   YA+ GMGA  A    AP+   L++FE+T  +Q  L +M++  ++  ++  
Sbjct: 382 FPDVSGSEALYALAGMGAVAAAVLGAPISTTLIVFELTGDWQTGLAVMVAVSLSTALASR 441

Query: 422 IGKNSMYEITLRRNH 436
           +   S +   L R +
Sbjct: 442 VVDRSFFLTQLERRN 456