Pairwise Alignments

Query, 224 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 96.3 bits (238), Expect = 4e-25
 Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 24/228 (10%)

Query: 1   MRVLLVDDHELFRAGLALLIKELFPDVELLHANTLSLGVNLAITERPDIVFLDLELPDGH 60
           M++LLVDDH + R G A L+K L P+V +  A +    +       P +V LDL LP   
Sbjct: 1   MKILLVDDHAVVRQGYASLLKALLPEVTVSEAASGEQALEQVQQSIPSLVVLDLGLPGIS 60

Query: 61  GSDALIQLKDARPSLPVVVVSADESVESVGRCLELRAMGYVPKSSSPEALHAAIVAVLSG 120
           G +   +L+   P +PV++ S  + +  V + L+  A GY+ K  +P+ L  A+  VL+G
Sbjct: 61  GLETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLAG 120

Query: 121 GVFLPAASIVGLKRAAGTDETQACQSDKAQPNDRVEPWNAPGLG----LTPREFETLAWL 176
             F        +++   TD   ACQ           P ++P  G    +TPRE E    L
Sbjct: 121 QTF--------IEQPLATD--LACQ----------RPSHSPAKGRLAEMTPREMEIFIML 160

Query: 177 VRGLPSKAIASKMGLEDITVRKYISHLLAHFNLRRRTELIVMLAEKGI 224
            RG+ ++ IA ++ +   TV  +++ L +   +  + EL+ +  + G+
Sbjct: 161 ARGIGNREIAERLCISSKTVSNHMALLKSKLGVSSQAELVHLAIDLGL 208