Pairwise Alignments

Query, 347 a.a., GDP-D-mannose dehydratase from Burkholderia phytofirmans PsJN

Subject, 356 a.a., GDP-mannose 4,6-dehydratase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  355 bits (911), Expect = e-102
 Identities = 189/344 (54%), Positives = 235/344 (68%), Gaps = 10/344 (2%)

Query: 5   RKAIITGVSGQDGAYLTKLLLDKGYIVTGTYRRTSSVNFWRMREL----GVIDHPNLRLV 60
           + A+I+G++GQDG+YL + LL KGY V G  RR+SS N  R+  L     V D    R +
Sbjct: 2   KTALISGITGQDGSYLAEFLLQKGYEVHGILRRSSSFNTGRIEHLYFDEWVRDMKQKRTI 61

Query: 61  E---HDLTDLGSTLRLLEGAQADELYNLAAQSFVGVSFDQPVTTAEVTGIGALNLLEGIR 117
                D+TD  S +R+++  Q DE+YNLAAQS V VSFD P  TAE   IG L +LE +R
Sbjct: 62  NLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAIGTLRMLEAVR 121

Query: 118 ILN--PKTRYYQASTSEMFGLVQAVPQREDTPFYPRSPYGVAKLFAHWSTINYRESYGLF 175
           IL    KTR YQASTSE+FG VQ VPQ+E TPFYPRSPYGVAK +  W T NYRESYG+F
Sbjct: 122 ILGLETKTRIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYRESYGMF 181

Query: 176 ASSGILFNHESPLRGREFVTRKITDTVAKIKLGKQDVLELGNLSAKRDWGFALEYVEGMW 235
           A +GILFNHES  RG  FVTRKI+   A+I  G+QD L LGNL A+RDWG+A +YVE MW
Sbjct: 182 AVNGILFNHESERRGETFVTRKISLAAARIAQGEQDKLYLGNLDARRDWGYAKDYVECMW 241

Query: 236 RMLQADEPDTFVLATGRTETVRDFVRMAFAAAGYQLEWSGKEERESGIDVATGKTLVRVN 295
            +LQ D P+ FV+ATG   TVR+F  +AF  AG +L W G+   E GIDVATGK LV V+
Sbjct: 242 LILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGVDEKGIDVATGKVLVEVD 301

Query: 296 PKFYRPAEVDLLIGCADKAHEKLGWKP-ETTLEQLCHMMVHADL 338
           PK++RPAEV+ L+G   KA   LGW P +T+  +L  +MV  D+
Sbjct: 302 PKYFRPAEVEQLLGDPTKARTLLGWNPRKTSFGELVSIMVRHDM 345