Pairwise Alignments

Query, 530 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 255 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 35/121 (28%), Positives = 59/121 (48%)

Query: 23  RGELDAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVRYHEAIALDPRDKDSHH 82
           RGE   A Q +  A AL P +A +         + N   EA+  Y+E++ L P   D + 
Sbjct: 38  RGEFGRAEQLWSEAIALAPDNAALWSNRGNVRVSQNHLEEAIADYNESVRLAPNAPDPYL 97

Query: 83  GLGWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCLQALGRFDEAHEAYRRAIEAA 142
             G   E +   ++A+  Y++A + +P    +HNN+GN   +LG +++A   +  A   A
Sbjct: 98  NRGTAWEGLQEWDKAIADYQQALQFSPGDAAAHNNLGNVRLSLGEYEQALSEFETASRLA 157

Query: 143 P 143
           P
Sbjct: 158 P 158



 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 31/137 (22%), Positives = 54/137 (39%)

Query: 7   PAVAREWRAEGDACAARGELDAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVR 66
           P  A  W   G+   ++  L+ A+  Y  +  L P               L  + +A+  
Sbjct: 56  PDNAALWSNRGNVRVSQNHLEEAIADYNESVRLAPNAPDPYLNRGTAWEGLQEWDKAIAD 115

Query: 67  YHEAIALDPRDKDSHHGLGWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCLQALG 126
           Y +A+   P D  +H+ LG     +   EQA+  +  A+R+ P    +  N+   L  L 
Sbjct: 116 YQQALQFSPGDAAAHNNLGNVRLSLGEYEQALSEFETASRLAPGFAFAGANVALTLFQLD 175

Query: 127 RFDEAHEAYRRAIEAAP 143
           R  +A +  R  +   P
Sbjct: 176 RTSDAIQRMRSLVRKYP 192



 Score = 27.3 bits (59), Expect = 7e-04
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 88  LEQMHRLE--QAVDAYREATRVNPQADGSHNNMGNCLQALGRFDEAHEAYRRAIEAAPQV 145
           LE  +R E  +A   + EA  + P      +N GN   +    +EA   Y  ++  AP  
Sbjct: 33  LEASYRGEFGRAEQLWSEAIALAPDNAALWSNRGNVRVSQNHLEEAIADYNESVRLAPNA 92

Query: 146 PLYYRN 151
           P  Y N
Sbjct: 93  PDPYLN 98