Pairwise Alignments

Query, 432 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 827 a.a., GAF domain/sensory box/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  159 bits (402), Expect = 3e-43
 Identities = 119/333 (35%), Positives = 162/333 (48%), Gaps = 14/333 (4%)

Query: 96  RDGAVVLACSIIKVGANLLMTVLTDISRQVAAERRARQTESWLAGIYTSVNDFAFFSLDA 155
           RDG          +  + ++ V  +IS   A +   R++E     ++ +  D      +A
Sbjct: 487 RDGTTTWFLYSGTLDGDTIIGVANEISEMRATQEALRRSEERYRALFDNAAD-GLLLYEA 545

Query: 156 EGRIESWNPSVERLTGFDETDVVGHTLSRFYARDEIVLHRSPEHIALTRDEGWHVEEFWC 215
           +G +   N ++ R  G     +VG  ++     +  VL R    +A   + G    E   
Sbjct: 546 DGTLIDVNETIARRLGESREAIVGRNVASIVEPE--VLERVRPRLAEILETGHASFE--- 600

Query: 216 DTKTGRRYWGQVLIAVLREEGDDISGYSVVL---RDVTERKVSSDNLARLLTTDHLTGVS 272
                R   G V + V      +  G  VVL   RD+TERK     L R  TTD LTG  
Sbjct: 601 --SVHRTAMGPVNVEV-HARRIEFEGRFVVLSSARDITERKNLEAALLREATTDPLTGGR 657

Query: 273 SRAHFFEIAEAEVARAERHGRALSVVMLDADYFKRINDTAGHQAGDEVLKRIAGEAKGLL 332
           +R  FF  A  E ARA RH   L+V+MLD D+FK +ND  GHQAGDEVL+  A      L
Sbjct: 658 NRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVLRAFAACCVEAL 717

Query: 333 RTSDTVARLGGEEFILMLPSTTTSEAVAVAERLRVAVERARIDTAVGTLKATVSLGVATV 392
           R  D   RLGGEEF  +LP+ +  EA+  AERLR  VER  +      L+ TVS+GV ++
Sbjct: 718 RAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERRSVVYEGTALQCTVSVGVTSL 777

Query: 393 STANPTLQSLLAAADRALYDAKRAGRNCVRGEM 425
           + A+     +L  ADRALY AK  GRN  R EM
Sbjct: 778 AAADLGFDDMLRRADRALYAAKDHGRN--RSEM 808



 Score = 25.0 bits (53), Expect = 0.009
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 110 GANLLMTVLTDISRQVAAERRARQTESWLAGIYTSVNDFAFFSLDAEGRIESWNPSVERL 169
           G  ++M V  D++ Q   ER   ++E     ++ +     F +  A+G     N  + ++
Sbjct: 380 GEEVVMLVGVDVTEQWRTERALAESERRYRALFDNAQAGIFRTSLADGTFLEANLRMAQM 439

Query: 170 TGFDE 174
            G+D+
Sbjct: 440 FGYDD 444