Pairwise Alignments

Query, 206 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 207 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  114 bits (284), Expect = 2e-30
 Identities = 61/186 (32%), Positives = 107/186 (57%), Gaps = 2/186 (1%)

Query: 20  YAISGFIEARTRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFYWVEHQGYLIAIFVMSL 79
           +A++G + A   R+D  G  ++A  TA GGGT+RD ++   P +W+    YLI I     
Sbjct: 15  FALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDPNYLIVILATVG 74

Query: 80  FAPTLLKMTSRLFSERVLLVADAIGLGLFSIGGTSIAHDAQMPWFTSVMMGVLTGVFGGV 139
           F    ++   ++  +  L +ADA+GL LF++ G   A    +   ++V+MG++TGV GG+
Sbjct: 75  FTLVFIRRPRKV-PQYTLPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITGVGGGI 133

Query: 140 IRDVLCNEVPLILRDSRPYATCAFVGCWLYVLLDYIEFDTVYSVLIATAFILLARLLTFR 199
           IRDVLC ++P++LR +  YAT + +G   Y L   +  ++  ++ ++    L+ RL   R
Sbjct: 134 IRDVLCRQIPMVLR-TEIYATASILGGIAYTLSLQLGMNSQTALWLSMLSALILRLAAIR 192

Query: 200 FNVRLP 205
           +++ LP
Sbjct: 193 WHLSLP 198



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query: 9   LTIMEALAIFAYAISGFIEARTRRLDAVGTFLVAIATAFGGGTLRDVLLERRP 61
           L I +AL +  + + G  +A +  L+ +   ++ + T  GGG +RDVL  + P
Sbjct: 91  LPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITGVGGGIIRDVLCRQIP 143



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 101 DAIGLGLFSIGGTSIAHDAQMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLI-LRDSRPYA 159
           D  G  +F++ G   A   +M  F   ++  +T V GG IRD +    P+  LRD     
Sbjct: 8   DLCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDPN--- 64

Query: 160 TCAFVGCWLYVLLDYIEFDTVY 181
                  +L V+L  + F  V+
Sbjct: 65  -------YLIVILATVGFTLVF 79