Pairwise Alignments

Query, 262 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 260 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 76/273 (27%), Positives = 116/273 (42%), Gaps = 35/273 (12%)

Query: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPAT-------AVGTDLLYAAATKA 60
           LLY + G F G L GL GVGGG ++ P+LV  F+    +       AVGT L     T  
Sbjct: 4   LLYLLLGGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSADILTHLAVGTSLATIVFTSI 63

Query: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATITLILLHRFGMDTPGA--GRLIQVVLGAALL 118
              L H  KG+V W   L +  G +  A +        G  T  A  G ++Q ++G   L
Sbjct: 64  NSILTHHRKGAVRWPTVLWMTFGILVGAAL--------GSLTAAAIQGPMLQKIIGVFAL 115

Query: 119 VTAVALVFRPQLAALGARKQRTPRQGRTLALTMLTGAVLGVLVSLTSVGAGAIGVTVL-- 176
             AV + F  +  A G    R            L G V+G   ++  +G G++ V  L  
Sbjct: 116 AMAVQMGFDLRPKATGRAPGRPE--------LSLVGVVIGWASAIFGIGGGSLSVPYLTW 167

Query: 177 --LLLYPLLPTTRIVGSDIAHAVPLTLLAGAGH------WLLGSIDWSMLLSLLVGSLPG 228
             + +   + T+   G  IA A  L+ +    H      W LG +    +L +   S+  
Sbjct: 168 RSVPMQQAVATSAACGLPIAIAGALSFMVVGWHETQLPDWSLGFVYLPAMLGIAATSMFF 227

Query: 229 IAIGSYLSSRAPDKLLRNLLAATLTLVGVRLVL 261
             +G+ L+ R   K+L+ L A  L  VG+  ++
Sbjct: 228 ARLGAKLAHRLSAKVLKRLFALLLLSVGINFLV 260