Pairwise Alignments

Query, 854 a.a., N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) from Burkholderia phytofirmans PsJN

Subject, 844 a.a., PTS system, glucose-specific IIA component / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) from Pseudomonas fluorescens FW300-N1B4

 Score =  595 bits (1535), Expect = e-174
 Identities = 356/843 (42%), Positives = 494/843 (58%), Gaps = 26/843 (3%)

Query: 10  LLAPMTGPVVPLANVPDPVFSGGMFGDGIGVDPLEGRLVAPCDATVTHLARTGHAVTLAT 69
           LLAP++G ++PL  VPD VFS  + GDG+ +DP    L AP    ++++  +GHAV++  
Sbjct: 9   LLAPLSGVLMPLDQVPDQVFSSRVIGDGLCIDPTSQTLCAPLTGVISNVQVSGHAVSITD 68

Query: 70  AEGAEILLHIGIDTVELNGKGFAPMVAQGAHVRAGDVLIEFDQDQVALNAPSLVSVIAIA 129
             G ++L+HIG+DTV L GKGF  +V +G  V  G  LIEFD D +AL+A SL++++ + 
Sbjct: 69  DNGVQVLMHIGLDTVNLAGKGFTRLVEEGQRVIVGQALIEFDADYIALHARSLLTLMLVV 128

Query: 130 NSDAFEIVERVQGGLLKAGETPLLVLRARDGAAAEASRQLSSTNVTEEARQQVTLVHAGG 189
           + + F  +   + G++++G+ PLL L   +GAA E   Q      ++     VTL +  G
Sbjct: 129 SGEPFTWLAP-ETGVVESGQ-PLLSLNPSEGAADEGIAQEGEALFSKP----VTLPNTNG 182

Query: 190 LHARPAARAREAARGFDARVEVRYEGRKAAIESVVGLLGLGAGEGATVELLGMGPQAAAA 249
           LHARPAA   +AA+GF A + +  +   A  +S+V ++ L    G  +++   G  A  A
Sbjct: 183 LHARPAAVFAQAAKGFAASICLHKQQDSANAKSLVAIMALQTAHGDVLQVSAAGADAEVA 242

Query: 250 VAAIANELTREAHGEVEEKPARQSSPAPQAVARPAGETLAPNTLAGVCAAPGVAVGKLVR 309
           +  +A EL     GE     A   + A Q  +           L GVCA+PG A G++V+
Sbjct: 243 IKTLA-ELLAAGCGEAVTLMAEVETVAAQVSSL--------TVLRGVCASPGAAFGQVVQ 293

Query: 310 WDDADIDPPEKANGTSAAE---SRLLDKAIATVDADLDTTVRDASQRGAVGEAGIFSVHR 366
             +  ++  E            SR L KA+  +    D    DA       +A IF  H+
Sbjct: 294 IAEQTLEVSESGVSPQVEREHLSRALAKAVLALQQLRDKATGDA-------QADIFKAHQ 346

Query: 367 VLLEDPTLLDAARDLISLGKSAGFAWREAIRAQIAILTNIEDALLAERAADLRDIEKRVL 426
            LLEDP LLD A  LI  GKSAGFAWR A  +   +   + +ALLAERAADL D+ +RVL
Sbjct: 347 ELLEDPGLLDQALALIDAGKSAGFAWRAATESTATLFKKLGNALLAERAADLADVGQRVL 406

Query: 427 RALGYTSATARTLPEEAVLAAEEFTPSDLSTLDRSRVTALVMARGGATSHAAILARQAGI 486
           + +      A  LP+ A+L AE+ TPS  + LD  +V       GGATSH AILAR +G+
Sbjct: 407 KLILGVEDRAMELPDGAILIAEQLTPSQTAGLDTRKVLGFATVGGGATSHVAILARASGL 466

Query: 487 PALVAVGDALHAIPEGTQVVVNATTGRLEFAPTELDVERARLERTRLADVREANRRTSQQ 546
           PA+  +   +  +  GT+V+++A  G L+  P    +E+ +  R      ++     +  
Sbjct: 467 PAICGLPVQVLTLINGTRVLLDADKGELQLDPELAAIEQLQANRQLQKQRQQYELANAGL 526

Query: 547 AAVTSDGRAIEVAANIATLDDAKTAVENGADSVGLLRTELLFIHRAAAPTTDEHRQSYQA 606
           AA T DG  +E+ ANIA+L +A+ A+  G D VGLLR+E L++ R  AP+ DE   +Y A
Sbjct: 527 AARTRDGHHVEITANIASLAEAEQAMALGGDGVGLLRSEFLYLDRNHAPSHDEQASTYGA 586

Query: 607 IVDALS-GRTAIIRTLDVGADKEVDYLTLPPEPNPALGLRGIRLAQVRPDLLDDQLRGLL 665
           I  AL   R  ++RTLDVG DK + Y+ +  E NP LG+RGIRL   RP LL DQ + +L
Sbjct: 587 IARALGPARNLVVRTLDVGGDKPLAYVPMDRETNPFLGMRGIRLCLERPQLLRDQFKAIL 646

Query: 666 AVQPLGAVRILLPMVTDVGELIRIRKRIDEFARELGRTEPIEVGVMIEVPSAALLADQLA 725
           +   L  + I+LPMVT + EL   R+ ++E A  LG TE  ++G+MIEVP+AAL+AD  A
Sbjct: 647 SSAGLARLHIMLPMVTQLSELRLARQLLEEEALALGLTELPKLGIMIEVPAAALMADLFA 706

Query: 726 QHADFLSIGTNDLTQYTLAMDRCQADLAAQADGLHPAVLRLIAATVQGADKHGKWVGVCG 785
              DF SIGTNDLTQYTLAMDR    LA+QAD  HP+VLRLIA TV+ A  HGKWVGVCG
Sbjct: 707 PEVDFFSIGTNDLTQYTLAMDRDHPRLASQADSFHPSVLRLIATTVKAAHAHGKWVGVCG 766

Query: 786 ALAGDPLAMPLLVGLGVTELSVDPVSVPGIKARVRNLDYQLCRQRAQDALALESAQAVRA 845
           ALA + LA+PLL+GLGV ELSV    +P IKA VR +D   C+  AQ  L LESA+ VR 
Sbjct: 767 ALASEKLAVPLLLGLGVDELSVSVPLIPAIKAAVREVDLLDCQAIAQQVLGLESAEQVRE 826

Query: 846 ASR 848
           A R
Sbjct: 827 ALR 829