Pairwise Alignments

Query, 449 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 455 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  415 bits (1067), Expect = e-120
 Identities = 215/441 (48%), Positives = 298/441 (67%), Gaps = 3/441 (0%)

Query: 7   VLYIEDDELVRRASVQSLQLAGFDVIGHASVESAAKTISADFSGVIVSDIRLPGASGLDL 66
           +L ++D+ L+  A VQ  +L  +  +     +     +  ++ G+++SD+ +P   GL L
Sbjct: 11  ILIVDDEPLIGSALVQLFELESYRALALTDAKQIGLGLPDNWPGIVISDVNMPDIDGLSL 70

Query: 67  LAQCHERAPDVPVILVTGHGDISMAVQAMRDGAYDFIEKPFASERLIETVRRALERRKLV 126
           +     +  D+P+IL+TGHGDI+MAVQA++ GAYDFIEKPF +E +++  +RALE+R L 
Sbjct: 71  MRTLLAQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIAKRALEKRALT 130

Query: 127 LENLALRRELAEQNSVAPRIIGRSPAIEQVRRLIANVAPTDASVLINGDTGAGKELIARS 186
           LEN +L+REL  Q++  PRI+G SP I+Q+R +I  V    A VLI G+TG GKEL+AR 
Sbjct: 131 LENRSLKRELESQSTPGPRILGHSPGIKQMRHIIHQVIDMPADVLIEGETGTGKELVARY 190

Query: 187 LHELSPRRDKPFIAVNCGALPEPMFESEMFGYEPGAFTGAAKRRVGKLEHASGGTLFLDE 246
           LH+ SPR +  F+A+NCGA+PE + ESE+FG E GAFTGA K R+GK E+A+GGTLFLDE
Sbjct: 191 LHDHSPRAEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEYANGGTLFLDE 250

Query: 247 IESMPLALQVKLLRVLQDGVLERLGSNQPIRVNCRVVAAAKGDMAEHVADGSFRRDLLYR 306
           IES PL+LQVKLLRVL+D  +ERLGSN+ I ++ R++AA K D+      G FR+DLLYR
Sbjct: 251 IESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKSLCDTGEFRQDLLYR 310

Query: 307 LNVVTIALPPLGERREDIVPLFEHFLLDAAVRYQRPAPILTDRQRAGLMQRDWPGNVREL 366
           LN+VT+ +P L ERREDI  LF HF   A+ RY +    LT    A L+  DWPGNVREL
Sbjct: 311 LNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLTAEYTAQLVSHDWPGNVREL 370

Query: 367 RNAADRFV-LGIADDPVMSFGDDGA--ATQPLKERVEQFERAVIAEALEQTGGVVAVAAD 423
           RN A+R+V LG       S G      A   L++RVE FER +I EAL    G + +  +
Sbjct: 371 RNLAERYVLLGPEAAFATSLGQSSQLNANMSLQQRVEFFERLLIEEALSNNKGSIKLTME 430

Query: 424 KLQLGKATLYEKIKRYGLAAK 444
           +L+L + TLY+K++++GL  K
Sbjct: 431 QLELPRKTLYDKMQKFGLNRK 451