Pairwise Alignments

Query, 350 a.a., LacI family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  131 bits (329), Expect = 3e-35
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 11/332 (3%)

Query: 4   IAKLTGVSQSTVSLVLNNATGAKFSETTRNKVLKAAHDLGYRLSLREPVSASADERNLIV 63
           +++L GVS +TVS  L +    + SE TR KV++A    GYR +     S    + N IV
Sbjct: 7   VSELAGVSTATVSRTLKSPE--RVSEQTRAKVMQAVKQAGYRPNWMA-TSVKTGKSNAIV 63

Query: 64  YLADEISTSPHPVVNIDGARDAAYASGKMLAVYSTHGNADIEKQVLDTTLSNPHVFGVIY 123
            L   +  +P  +  I+G   AA   G  + +  T G    E +     L+N    G+I 
Sbjct: 64  VLVPNL-VNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTN-RADGLIQ 121

Query: 124 ATVYTRKVTPPAALSQVPTVLLNCYTGEGG--FSSVVPAEVAGGHLATDYLLQSGHRRIG 181
                      A L+    ++  C   EG   +  +     A G     +L+  GH+  G
Sbjct: 122 LDHSFPFSDNDADLAATIPMVSVCERIEGDRKYPFIELDNHAAGRALAHHLIGFGHKHFG 181

Query: 182 YINGEPWQDASKDRLKGYRTALATADLPFAQEMVRDGDWSSGLGFELTLSLMRESNPPTA 241
            I G+       DRL G  + L    + F ++M+    +S   G E    L+  +  P+A
Sbjct: 182 IIAGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSIETGIEGARELLSRNPRPSA 241

Query: 242 IFCANDLTAIGAIEALKQLGLRVPEDVSVLGYDDQEIARHTHPPLSTVVLPNYELGRWAV 301
           IFC ND  AIGA+  +K  GL++P+D+SV G+D+ +++ +  PPL+T+  P YE+GR AV
Sbjct: 242 IFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTIDQPAYEMGRNAV 301

Query: 302 ETLLQEEHNRAAGAPVRHRMVKLDGPLVERGS 333
           E L+Q+ +      P+    V +   L+ERGS
Sbjct: 302 EVLVQQINR----LPLARSRVIMPFHLLERGS 329