Pairwise Alignments

Query, 382 a.a., cell wall shape-determining protein from Burkholderia phytofirmans PsJN

Subject, 371 a.a., rod shape-determining protein RodA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  220 bits (561), Expect = 4e-62
 Identities = 139/383 (36%), Positives = 205/383 (53%), Gaps = 31/383 (8%)

Query: 13  KRMFAGFDRPLALIVFLLLCVGIVTLYSASLDVPGRVEDQLRNIMLTFV---LMWALANV 69
           +R+    +  L     LL   G+  LYSAS     R+ED +  ++ TF    L+W L  +
Sbjct: 6   RRLITHMNWGLVGFTALLFLFGVANLYSAS---GVRMEDGI--VVSTFYQKQLLWGLMGL 60

Query: 70  PPTT---------LMRFAVPLYTFGIALLVAVALFGLTRKGAKRWINVGVV-IQPSEILK 119
                        +   A+PL+   + LL A+ +FG    GA+RW+ +G + +QPSE+ K
Sbjct: 61  GGMVFFMLFDYRHMKSLALPLFIVTMILLAAIPVFGKVVYGARRWLPLGFMNLQPSEVAK 120

Query: 120 IATPLMLAWYYQRREGVMRWYDFLVGLVILAVPVGLIAKQPDLGTAVLVFAAGLFVIYFA 179
           IA  +M A +  R    + W      L +  +P G I  QPDLGT +L+      +  F 
Sbjct: 121 IAILIMGARFLSRSREPLGWKGLFEVLALGGLPAGFIVMQPDLGTTLLLLMLLGGITLFH 180

Query: 180 GLSFKLIVPVLIAGVIAVASIAAFQDKICQPEVQWPLMHDYQKHRICTLLDPTSDPLGKG 239
           G+       VL   ++ V S+           + W  +HDYQK RI T LDP +DPLG G
Sbjct: 181 GVK----PGVLKTCLVVVPSMLP---------LAWFRLHDYQKQRIMTFLDPGNDPLGAG 227

Query: 240 FHTIQAVIAIGSGGPLGKGWLKGTQAHLEFIPEKHTDFIFAVFSEEFGLAGGIVLLTLYM 299
           +H IQ+ IAIGSG   GKG+L GTQ+ L F+PEKHTDF  AVF EE+G  G ++L+ L+ 
Sbjct: 228 YHIIQSQIAIGSGQLWGKGFLGGTQSQLRFLPEKHTDFALAVFGEEWGFIGCVLLVVLFC 287

Query: 300 LLIARGLYIAANGATLFGRLLAGSLTMAFFTYAFVNIGMVSGILPVVGVPLPFMSYGGTA 359
           L +      A +    FG  L   +   FF    +N+GMV G++PVVGVPLPF+SYGG+A
Sbjct: 288 LFLLSIFNTARDAKDRFGSYLTVGVFFYFFWQILINMGMVMGLMPVVGVPLPFISYGGSA 347

Query: 360 LTTLGVAIGLIMSVARQKRLMQS 382
                  IG++++V+ ++ + ++
Sbjct: 348 TLVNFSLIGIVLNVSMRRFMFKT 370