Pairwise Alignments

Query, 659 a.a., excinuclease ABC subunit B from Burkholderia phytofirmans PsJN

Subject, 674 a.a., excinuclease ABC subunit UvrB from Rhodanobacter denitrificans MT42

 Score =  667 bits (1721), Expect = 0.0
 Identities = 335/593 (56%), Positives = 438/593 (73%)

Query: 3   TGTFILHSAYTPAGDQPEAIARLIEGIEEGAKHQTLKGITGSGKTFTMANVIHRLNRPTL 62
           T  F L + Y P+GDQP+AIARL EG E G   QTL G+TGSGKT+T+ANVI R+ RPT+
Sbjct: 2   TDRFELVAPYQPSGDQPQAIARLTEGFEAGLAAQTLLGVTGSGKTYTIANVIERVQRPTI 61

Query: 63  MLAPNKTLTAQLYEEMKQFFPENAVEFFVSYYDFFQPEVYMPGSDRFIQKDSAINDHLER 122
           ++APNKTL AQLY E ++FFP NAVE+FVSYYD++QPE Y+  SD FI+KD++IN+H+E+
Sbjct: 62  VMAPNKTLAAQLYGEFREFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIEQ 121

Query: 123 LRLSTTKSLIERRDVIVVASVSSIYGLGDPNGYRELQIALSRGISFRPRELIRRLVRLQY 182
           +RLS TK+L+ RRD I+VA+VS+IYGLG+P  Y  L++ L++G     R+LI +L  LQY
Sbjct: 122 MRLSATKALLSRRDSIIVATVSAIYGLGNPEDYLSLRLILAKGERIDQRKLIHQLTELQY 181

Query: 183 ERVERTLKRGTFRVRGDAVDIFPADSEYRAVRVELLDDSVQSVHWIDPATGAQLGEIDHY 242
            R E  L+RGT+RVRG+ +D+FPA+SE  A+R+EL D  V+ +   DP TG  + +I  Y
Sbjct: 182 TRNEMELRRGTYRVRGEIIDVFPAESETEALRIELFDGEVEDMALFDPLTGETIRKIPRY 241

Query: 243 LVSPKTLFATPRNRVNSATIKILAEMEARVAELNSENRLVEADRLYERITGDVEMMRELG 302
            V P+T +A+ R  V +A   I  E++ R+  L  EN+LVEA RL +R   D+EMM E+G
Sbjct: 242 TVYPRTHYASTRESVLNAIETIKVELKERLEYLYRENKLVEAQRLEQRTRFDLEMMAEVG 301

Query: 303 YCPGMENYSCYLNGRDPALPPNTLLDYLPTDGLLFVDESHVMVPQISAMYKGDQSRKDTL 362
           YC G+ENYS +L  R P  PP TL DYLP DGLL VDESHV VPQ+ AMYKGD+SRK+TL
Sbjct: 302 YCQGIENYSRHLTRRAPGEPPPTLFDYLPADGLLVVDESHVTVPQLGAMYKGDRSRKETL 361

Query: 363 IDYGFRLPSSKNNRPLSFEEFEKVKPQTIFVSATPGNYELAISKGRFVSQIIRPTGLLDP 422
           +++GFRLPS+ +NRPL FEE+E   P+ I+VSATP +YEL  S       ++RPTGL+DP
Sbjct: 362 VEFGFRLPSAMDNRPLRFEEWEARVPRAIYVSATPRDYELHKSGDAVTELVVRPTGLVDP 421

Query: 423 EVEVRTTDGCIDDLLVEIKKCVKNKNRVLVTTLTKRAAEELNDFMTERGIRSRYLHADIK 482
           EVEVR     +DDLL E+ K V   +RVLVTTLTKR AE L +++ E  ++ RYLH+DI+
Sbjct: 422 EVEVRPVRTQVDDLLSEVHKRVAIGDRVLVTTLTKRMAENLTEYLAEHDVKVRYLHSDIE 481

Query: 483 TEDRIEIINGLREGEFDVLIGISLLREGLDIPEAALVAILDADHAGFLRSAQALIQMIGR 542
           T +R EII  LR GEFDVL+GI+LLREGLD+PE +LVA+LDAD  GFLRS  +LIQ IGR
Sbjct: 482 TVERSEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSTGSLIQTIGR 541

Query: 543 VARNEEGRAILYADGITPAMKQAMDETGSRRKKQIEFNEENGIVPASSVRKLA 595
            ARN  G+AILYAD +T +M+ AM ET  RR+KQ+ +N + GI P + VR++A
Sbjct: 542 AARNVRGKAILYADNVTRSMQAAMGETARRREKQVAWNLQQGITPTTIVRRIA 594