Pairwise Alignments

Query, 659 a.a., excinuclease ABC subunit B from Burkholderia phytofirmans PsJN

Subject, 693 a.a., excinuclease ABC subunit B from Herbaspirillum seropedicae SmR1

 Score =  643 bits (1659), Expect = 0.0
 Identities = 335/663 (50%), Positives = 450/663 (67%), Gaps = 10/663 (1%)

Query: 2   PTGTFILHSAYTPAGDQPEAIARLIEGIEEGAKHQTLKGITGSGKTFTMANVIHRLNRPT 61
           P   F L+  + PAGDQP AI +L+EG+ +G  +QTL G+TGSGKT+TMAN I RL RP 
Sbjct: 20  PDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVTGSGKTYTMANTIARLGRPA 79

Query: 62  LMLAPNKTLTAQLYEEMKQFFPENAVEFFVSYYDFFQPEVYMPGSDRFIQKDSAINDHLE 121
           ++ APNKTL AQLY E ++FFP NAVE+FVSYYD++QPE Y+P  D FI+KDS+IN+H+E
Sbjct: 80  IVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIE 139

Query: 122 RLRLSTTKSLIERRDVIVVASVSSIYGLGDPNGYRELQIALSRGISFRPRELIRRLVRLQ 181
           ++RLS TKSL+ERRDV++VA+VS+IYG+G+PN Y ++ + L        R++I RL+++Q
Sbjct: 140 QMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTLRAKDKVSQRDVIARLIQMQ 199

Query: 182 YERVERTLKRGTFRVRGDAVDIFPADSEYRAVRVELLDDSVQSVHWIDPATGAQLGEIDH 241
           Y R E    RGTFRVRGD +D+FPA+    AVR+E  DD + S+   DP TG    +I  
Sbjct: 200 YTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEIDSLQLFDPLTGRVRQKIPR 259

Query: 242 YLVSPKTLFATPRNRVNSATIKILAEMEARVAELNSENRLVEADRLYERITGDVEMMREL 301
           + + P + + TPR+ V  A   I  E+  R+     EN+L+E  RL +R   D+EMM E+
Sbjct: 260 FTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLIEEQRLEQRTRFDIEMMTEI 319

Query: 302 GYCPGMENYSCYLNGRDPALPPNTLLDYLPTDGLLFVDESHVMVPQISAMYKGDQSRKDT 361
           G+  G+ENYS +L+G  P  PP TL+DYLP D ++F+DESHV++ Q++ MY GD++RK  
Sbjct: 320 GFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESHVLIGQLNGMYNGDRARKVN 379

Query: 362 LIDYGFRLPSSKNNRPLSFEEFEKVKPQTIFVSATPGNYELAISKGRFVSQIIRPTGLLD 421
           L+DYGFRLPS+ +NRPL F+EFEK   QTIFVSATP +YE      + V Q++RPTGL+D
Sbjct: 380 LVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYE-NTHADQVVEQVVRPTGLVD 438

Query: 422 PEVEVRTTDGCIDDLLVEIKKCVKNKNRVLVTTLTKRAAEELNDFMTERGIRSRYLHADI 481
           P + VR     +DDL+ EI   +    RVLVTTLTKR AE+L +F+++ GI+ RYLH+DI
Sbjct: 439 PIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQLTEFLSDNGIKVRYLHSDI 498

Query: 482 KTEDRIEIINGLREGEFDVLIGISLLREGLDIPEAALVAILDADHAGFLRSAQALIQMIG 541
            T +R+EII  LR G FDV++GI+LLREGLDIPE +LVAILDAD  GFLRS ++LIQ IG
Sbjct: 499 DTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIG 558

Query: 542 RVARNEEGRAILYADGITPAMKQAMDETGSRRKKQIEFNEENGIVPA---SSVRKLASEH 598
           R ARN  G AILY D +T +M +A+ ET  RR KQ+ FN  NGIVP      +R+L    
Sbjct: 559 RAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAANGIVPTGIKKEIRELIDGV 618

Query: 599 VEPEENASVHSVA-FCKNLSDLCDQITKKEERLLEFTDAGDEKKIE-----DTRDQLNGL 652
             P +  +   VA   KN   + ++   KE + LE       K +E       RDQL+ L
Sbjct: 619 FNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHAKNLEFEKAAAARDQLHLL 678

Query: 653 YRQ 655
            +Q
Sbjct: 679 KQQ 681