Pairwise Alignments

Query, 545 a.a., chromosomal replication initiator protein DnaA from Burkholderia phytofirmans PsJN

Subject, 470 a.a., chromosomal replication initiator protein dnaA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  231 bits (588), Expect = 6e-65
 Identities = 116/336 (34%), Positives = 199/336 (59%), Gaps = 1/336 (0%)

Query: 210 LNPVLTFDNFVTGKANQLARAAAIQVADNP-GISYNPLFLYGGVGLGKTHLIHAIGNQLL 268
           LNP   F+NF+ G +N+L+R+ A  VA NP G ++NPLFLYG  G+GKTHL +AIG ++ 
Sbjct: 132 LNPNYNFENFIEGYSNKLSRSVAEAVAQNPAGTAFNPLFLYGASGVGKTHLANAIGTKIK 191

Query: 269 MDKAGARIRYIHAEQYVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKSRTQEEF 328
              A  R+ Y+ A  +      + +    +DF  +Y ++D+L+IDDIQ F+G ++TQ  F
Sbjct: 192 ELYADKRVLYVSAHLFQVQYTDSVRNNTTNDFINFYQTIDVLIIDDIQEFAGVTKTQNTF 251

Query: 329 FYAFEALVANKAQVIITSDTYPKEISGIDDRLISRFDSGLTVAIEPPELEMRVAILMRKA 388
           F+ F  L  N  Q+I+TSD  P  + G+++RL++RF  G+   +E P +E+R  IL  K 
Sbjct: 252 FHIFNHLHQNGKQLILTSDRAPVLLQGMEERLLTRFKWGMVAELEKPTVELRKNILRNKI 311

Query: 389 QSEFVSLNEDVAFFVAKHLRSNVRELEGALRKILAYSKFHGREITIEVTKEALKDLLTVQ 448
             + +    +V  ++A+++  +VR+LEG +  I+A S    +EI +++ +  +  ++  +
Sbjct: 312 HRDGLQFPPEVIDYIAENVNESVRDLEGIVIAIMARSTIFNKEIDLDLAQHIVHGVVHNE 371

Query: 449 NRQISVENIQKTTADFYSIKVADMYSKKRPANIARPRQIAMYLAKELTQKSLPEIGELFG 508
            + +++++I K     + ++ + +++K R   + + RQIAMYLAK  T  S  +IG+  G
Sbjct: 372 TKAVTIDDILKVVCKHFDLEASAIHTKSRKREVVQARQIAMYLAKNYTDFSTSKIGKFIG 431

Query: 509 GRDHTTVLHAVRKIADERSKDAQLNHELHVLEQTLK 544
            +DH TVLHA + +  +   D     E+  +E  LK
Sbjct: 432 NKDHATVLHACKTVKGQLEVDKSFQAEVQEIESLLK 467



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 5  WQHCSALLERELTPQQYVTWIKPLAPVAFDAAANTLSIAAPNRFKLDWVKSQF 57
          W  C  +++  +    Y TW  P+ P+ ++    TL +  P++F  + ++ +F
Sbjct: 10 WNRCLEVIKDNVPETTYNTWFAPIVPLKYE--DKTLIVQIPSQFFYEILEEKF 60