Pairwise Alignments

Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 917 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  272 bits (696), Expect = 1e-76
 Identities = 187/547 (34%), Positives = 293/547 (53%), Gaps = 34/547 (6%)

Query: 889  AKQEADTANAAKSAFLANMSHEIRTPMNAVLGMLQLMQYTALSVQQQGYVTKAQTAAKSL 948
            A++EA  A+  KS FLANMSHEIRTP+N +LG  QL+Q + L+ +QQ Y+   + +A SL
Sbjct: 273  ARKEALEASRIKSEFLANMSHEIRTPLNGILGFTQLLQKSDLTPRQQDYLGTIEKSADSL 332

Query: 949  LGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDLAVVLSANHGNSDVEVMFDLDSALPAW 1008
            LG++N+ILDFSKI+AGKL LD  P ++  L+ D   +L+       +E++  +    P  
Sbjct: 333  LGIINEILDFSKIEAGKLVLDSIPFNLRDLIEDTLTILAPAAHTKQLELVSLVYRDTPLS 392

Query: 1009 LLADQLRLQQILINLAGNALKFTPHGQVIVGLECLRHEAESVTVQFSIVDSGIGISEEQI 1068
            L+ D LRL+Q+L NL  NA+KFT  G + V        A+   ++ S+ D+GIG++++ +
Sbjct: 393  LVGDPLRLKQVLTNLISNAIKFTNEGTIAVRAMVEDDNADRAQLRISVQDTGIGLTDQDL 452

Query: 1069 ERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQLQVTSKVGVGSRFWFDLTFPVM 1128
              +F  F QA++S SR+ GGTGLGL ISKRL+E MGG++ V S    GS FW  L+ P  
Sbjct: 453  RALFQAFSQADNSMSRQPGGTGLGLVISKRLIEQMGGEIGVDSIPDEGSEFWISLSLPKA 512

Query: 1129 --EVEANPRADLSGYRILVVDDNQITTEILSKILSDYGCVVETASGGYQAIEKVKQATAN 1186
              +VE  P   L G RI +++ + +  + L   L   G  V T    +  ++++ QA   
Sbjct: 513  RDDVEDLPHPALQGRRIALLEQHPLARQALQHQLESLGLEVHT----FDTLDQM-QAAIG 567

Query: 1187 AQQFDVVLMDWRMPDIDGLQ------TAEMLKNAGTGSYTPLVVMLTAYGHEVIAESQHI 1240
            AQ+    L+D  +  +   +      +  +++    G    ++   T  GH       + 
Sbjct: 568  AQRQSSQLIDLAVLGVTAREIQPEALSRRLMEIEALGCKCVVLCPTTEQGH-------YH 620

Query: 1241 NNVPFVNFLT----KPVTSQILAEAVLNAIEGKTMDANPKPRSQRLLAGLTLLVVEDNQL 1296
            + +P V+  T    KP  ++ L   ++  +      A P   +    A   +L V+DN  
Sbjct: 621  DTLPEVHSYTQLQGKPACTRKLQRVLVELVRPNQTYAAPVAAAPSRAA--RVLCVDDNPA 678

Query: 1297 NREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDIDGLEATRRIR-- 1354
            N  ++  LL   GA VV  + G   +  V      FD V+MD+QMP +DG + T  IR  
Sbjct: 679  NLLLVKTLLGDMGAEVVAVDNGPAALDAVKQHS--FDLVLMDVQMPGMDGRQTTEAIRHW 736

Query: 1355 -ADGRFDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQQLLPNILR---LVGRDAA 1410
                    LPI+A+TA+A   +K+  L++GM+ +++KPI  +QL   +L+   LV R   
Sbjct: 737  EHTSGSTPLPIIALTAHALANEKRSLLQSGMDDYLTKPISDRQLAQVVLKWTGLVLRSQP 796

Query: 1411 QFAEPES 1417
            Q +EP S
Sbjct: 797  QHSEPSS 803