Pairwise Alignments
Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3
Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H
Score = 918 bits (2372), Expect = 0.0
Identities = 598/1562 (38%), Positives = 864/1562 (55%), Gaps = 62/1562 (3%)
Query: 13 WGLFVLLVGLFFSAVLAWQVSRINAQTISQALEERAQQISENVTNRITLYQYGLRGARGM 72
W + +L G+ S W V++ NA+ A ++S+ + RITLYQYGLRGARG+
Sbjct: 15 WIVGAVLAGIGLSGFAVWWVTQRNAELAETAASLELTRLSDAIAERITLYQYGLRGARGV 74
Query: 73 ILTAGEDHISRSMFQNYSLTRDVDEEFPGARGFGFIRRVPKENEAQFLARVKSMDWPDFH 132
I+T GE I+R +F+ YS TRD+ EFPGARGFGFIRRVP + E +FLA ++ WPDF
Sbjct: 75 IVTFGERGITREVFRGYSKTRDIGAEFPGARGFGFIRRVPADREERFLAEARADGWPDFA 134
Query: 133 IRQLNPNEGEKYLIEYIEPLDRNKAAVGLDIASESHRKEAADRALLSGAVQISAPITLVQ 192
I Q P+EGE+++I+YIEP RN AVGLDIASE +R+EAA A+ +G V+++ PITLVQ
Sbjct: 135 IAQFTPHEGERFVIQYIEPAQRNLKAVGLDIASEKNRREAALAAIDTGQVRLTGPITLVQ 194
Query: 193 ATGKPLQSFLILLPVYRSGTVPKTPEERLAQGFGWSYAPLVTTEILTGLSLHQKMTKLML 252
A+G QSFLILLP+YR+ + P+T ER AQ FGWSYAPL E+L+GL +Q L L
Sbjct: 195 ASGDKSQSFLILLPIYRTLSTPETLAERRAQAFGWSYAPLNMPEVLSGLVPNQDRLALTL 254
Query: 253 SDVTDEQQPINFFETHANDLSELSDYSYKSTKTIFGRHWQFEVIAYPAFIKSLHLNKPSL 312
DVT+ + F T D + + T++IFGR W+ V PA+ ++ P +
Sbjct: 255 RDVTNPAEAETVF-TSNTDCAAAECVTKTLTRSIFGRVWEISVTVSPAYGHAVQRIAPWV 313
Query: 313 VLFSGCLFSLLLAALIAMWSLSLQRKQQVLAEQARRASMLEHSLDGIISYDLAGNITSWN 372
V+ G S+L A A+ L+ R++++ QAR ++++E+S D II L G I WN
Sbjct: 314 VVSLGIGASILAAGFAAVIGLNQARRREIAQAQARLSTIVENSGDAIIGEALDGTIVGWN 373
Query: 373 QGAERLFGFTEPETLGLPSSELIVPPSIVLEEQALFAEVLAGKTVLNRVSRHQRADGSNL 432
+ AE LFG+ PE +G + L++P + E Q++ L+G+ V+ ++ ADG
Sbjct: 374 RAAEALFGYKAPEVIGKALAPLLIPADRMAENQSIVLSALSGEAVMAFDTQRIHADGHLF 433
Query: 433 STSTTALPIYDEHGDIVGLSQTIRDITAQQDAERHILNLNASLERQVAKRTHALQQALLE 492
S TA P++D G +VG++ IRDI ++ AE+ +L NA LE+QVA RT L++A
Sbjct: 434 DVSMTACPVHDRLGHVVGVANLIRDIRKRKAAEQSLLEFNAQLEKQVASRTAELEKARRA 493
Query: 493 NQALLDTINQQLHYSVTDLDGVILDVNEHFCLISGYAREELVGKTHAVLKSGEHDAAFWK 552
Q +LD++ + Y DL I N +C L+GK+ L GE +
Sbjct: 494 LQTVLDSVPSMIGYWDRDLHCHI--ANRAYCSWFNVDPSGLIGKSMRSLL-GEALFTANR 550
Query: 553 AMWEQIKAGKSWHGE-ICNRGKDQQLKW-FDTVIGSVFDEHGQVERFVALQTDITERKLA 610
E + G+ E + R Q ++ I V D G+V F AL D++E L
Sbjct: 551 PFIEAVLRGQPQTFERMIPRPNGQGVRHSLAHYIPDVVD--GEVLGFYALVHDVSE--LV 606
Query: 611 QIEKNRIATLLTN--VLDAASEMTIIA-ADPQGIITIFNRGAERMLWYSAEEIIG---KT 664
+ + A L N +L E + + D G I N +++ Y+ +E++G +
Sbjct: 607 EGRQKLDAALRENEALLRTIDEQLLCSITDRNGNIISINDNFCKLMGYTKDELLGLDHRI 666
Query: 665 TPAPFHIADEIAARAAELSVEYGQKIQGFDTFVHKAREEGSETRTWTYVRKDGSQLPISL 724
+ H D+ ++ G +G +KA KDG+ +
Sbjct: 667 MNSGLH--DKTFWADVWATISAGGSWRG--EVCNKA--------------KDGALYWLDS 708
Query: 725 SVTAMRGNDGEILGYLGIGVDISQIVAQQEALLTASNHL-----SKAAEVAKLGIWTWNL 779
+T G DG I Y+ + +DI+ + EA SN L + A E + + +
Sbjct: 709 VLTPFFGEDGSIDRYVALRIDITDR-KKAEAERNRSNTLLRSVLASAREFSIIATDPDGV 767
Query: 780 LDNSLQWNDRMFAMYDQPESLKQQGLSYEHW------RMRVHPDDV---IEAEETLKRAV 830
+ +++ Y E + +Q + H R R D+ IE
Sbjct: 768 ITIFNSGAEKLLG-YSAEEMVGKQTPALIHLADQVAERGRSLSDEFGVPIEGFRVFVHRS 826
Query: 831 EHDEPYEPIFRILTTDGEVRYVQAAAKIERDRQGHVIRVIGINIDITAQRQLEKTLRNAK 890
E D + + DG V R+ G + +G+ D++ +++ E+ L AK
Sbjct: 827 ERDGVEAQEWTYVRKDGGHLEVLLVVTAIREDDGRIAGYLGVAQDVSRRKEFERALVLAK 886
Query: 891 QEADTANAAKSAFLANMSHEIRTPMNAVLGMLQLMQYTALSVQQQGYVTKAQTAAKSLLG 950
Q A+ A+ K FLANMSHEIRTPMNA+LGML L+Q TAL+ Q YV KA +AA SLLG
Sbjct: 887 QAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQRTALTPHQADYVCKAHSAAGSLLG 946
Query: 951 LLNDILDFSKIDAGKLKLDLHPCSIELLMRDLAVVLSANHGNSDVEVMFDLDSALPAWLL 1010
LLNDILDFSKI+AGKL L+ HP +E ++RDLAVVLS ++G+ VEV+FD+ LP +
Sbjct: 947 LLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGSYGDKGVEVLFDIAPHLPDSFI 1006
Query: 1011 ADQLRLQQILINLAGNALKFTPHGQVIVGLECLRHEAESVTVQFSIVDSGIGISEEQIER 1070
D LRL+Q+L+NLAGNALKFT GQVIV + L E + +T++ ++ D+GIGI+ +Q+
Sbjct: 1007 GDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLAREDDRLTMRMAVSDTGIGIAADQLAS 1066
Query: 1071 IFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQLQVTSKVGVGSRFWFDLTFPVMEV 1130
IF FEQAE+ST+RRFGG+GLGL I++ LVE MGG L+V S+ G GSRFWFD+T PV
Sbjct: 1067 IFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVLRVESQPGRGSRFWFDITLPVSGE 1126
Query: 1131 EANPRADLSGYRILVVDDNQITTEILSKILSDYGCVVETASGGYQAIEKVKQATANAQQF 1190
+ R+LVV+DN + IL++ + G + + ++ A A + +
Sbjct: 1127 GSESAESGRPLRVLVVEDNPVAGGILAQTVQGLGYDCDLVQESAETKARIVAADAAGRPY 1186
Query: 1191 DVVLMDWRMPDIDGLQTAEMLKNAGTGSYTPLVVMLTAYGHEVIAESQHINNVPFVNFLT 1250
D VL+DWRMP++DGL TA +L+ G ++M+TAYG +V++ ++ + PF LT
Sbjct: 1187 DAVLLDWRMPEVDGLTTARILREMGVTLCPQSIIMVTAYGRDVLSLAEQTGDAPFDAVLT 1246
Query: 1251 KPVTSQILAEAVLN----AIEGKTMDANPKPRSQRLLAGLTLLVVEDNQLNREVIDELLT 1306
KPVT L +A+L EG+ P+ LAG LLVVEDN +NR+V ELL
Sbjct: 1247 KPVTPGQLRDALLRRDRATSEGEATALAPRGLPTP-LAGRRLLVVEDNAINRQVAAELLA 1305
Query: 1307 YEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDIDGLEATRRIRADGRFDQLPILA 1366
GA + LAEGG GV VL +DAV+MD+QMPDIDG EATRRIRAD RF LPI+A
Sbjct: 1306 GAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDIDGFEATRRIRADARFKALPIVA 1365
Query: 1367 MTANASQADKQECLEAGMNAHVSKPIDMQQLLPNILRLVGR---DAAQFAEPESMHLDAQ 1423
MTANAS+AD++ CL AGM HV KPID+ + ++ L+ + A P M +
Sbjct: 1366 MTANASRADREACLAAGMTEHVGKPIDITATIDVLVSLMTEGMTEGEPIAPPSPMGGTGR 1425
Query: 1424 HNLEGETLLDDIRLILRRFGGNQVFFEKMASSFAPEMIKQLSLFKQSTKTFDYATTAAIS 1483
E LL+D+ I R GG ++ +FA + L + D++ +
Sbjct: 1426 EVPSDEPLLEDLDSIAERLGGQVDLLRRLLPTFAERTGELLDEIEDLIGRGDWSALSMAF 1485
Query: 1484 HAIKGIASNFGARRLAVHAAFLEKQFKQEGLELLEIKR----WTDTLESLINQSIEQLSG 1539
H IKG A++ GA LA HAA E++ +++G L+ R D + +L+ S+E LS
Sbjct: 1486 HTIKGSAASMGAVALASHAALWEERLREDGPGTLDALRRDQALCDQMRALLAASLEALSS 1545
Query: 1540 FL 1541
L
Sbjct: 1546 HL 1547