Pairwise Alignments

Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  382 bits (980), Expect = e-109
 Identities = 276/903 (30%), Positives = 451/903 (49%), Gaps = 47/903 (5%)

Query: 747  SQIVAQQEALLTASNHLSKAAEVAKLGI-WTWNLLDNSLQWNDRMFAMYDQPESLKQQGL 805
            +++V   ++L  A+       + A++GI  T + +             Y+  E L+Q   
Sbjct: 388  AELVGLAKSLRDANQEQQAVFDAARIGIILTRDRIIRRCNRTIEEILGYEPGEILEQ--- 444

Query: 806  SYEHWRMRVHPDDV--IEAEETLKRAVEHDEPYEPIFRILTTDGEVRYVQAAAKIERDRQ 863
            S   W    +PD+   +   E ++  +     +     ++  DG   + +  A++  DR 
Sbjct: 445  STRIW----YPDEATFLAVGERVREGLTRHGYFREELELVRKDGSRFWGRIMAQVI-DRN 499

Query: 864  GHVIRVIGINIDITAQRQLEKTLRNAKQEADTANAAKSAFLANMSHEIRTPMNAVLGMLQ 923
                 + G   DI  +R++   +  AK  A+ A  AK+ FLANMSHEIRTPMNAV+GM  
Sbjct: 500  APEKGMAGTVEDIGEERRILAEMAQAKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTH 559

Query: 924  LMQYTALSVQQQGYVTKAQTAAKSLLGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDLA 983
            L   T L  +Q+ Y+ K Q +++ LLG++NDILDFSK +AGKL ++     +E ++ D++
Sbjct: 560  LALKTDLDERQREYLRKIQHSSQHLLGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVS 619

Query: 984  VVLSANHGNSDVEVMFDLDSALPAWLLADQLRLQQILINLAGNALKFTPHGQVIVGLECL 1043
             ++S    +  +E + ++   +P  L+ D LR+ Q+LIN A NA+KFT  G+V + +   
Sbjct: 620  SLMSERATSKGLEFVIEMADEVPRHLVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLE 679

Query: 1044 RHEAESVTVQFSIVDSGIGISEEQIERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELM 1103
              + + V ++F++ D+GIGI   ++  +F  F+QA+SST+R++GGTGLGL I+KRL ELM
Sbjct: 680  EDQGQEVLLRFAVHDTGIGIKAGELPTLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELM 739

Query: 1104 GGQLQVTSKVGVGSRFWFDLTF---PVMEVEANPRADLSGYRILVVDDNQITTEILSKIL 1160
            GGQ+   S+ G GS FWF             A PR DL   R+LVVDD+    +++  +L
Sbjct: 740  GGQVGAESEPGRGSTFWFTARLGRSSNARHRAPPRPDLRTRRLLVVDDHDHARDVVCDML 799

Query: 1161 SDYGCVVETASGGYQAIEKVKQATANAQQFDVVLMDWRMPDIDGLQTAEMLKNAGTGSYT 1220
                  V     G + + ++++A+A  + +D+V +DW+MP++DGL TA  ++        
Sbjct: 800  RSMSFQVSDTDSGNRCLAELQRASAAGEPYDIVFLDWQMPEMDGLATAREIRRLEL-PQP 858

Query: 1221 PLVVMLTAYGHEVIAESQHINNVPFV-NFLTKPVTSQILAEAVLNAI---EGKTMDANPK 1276
            PLV+M+TAYG + +A S   + +  +   L KPV+   L   V+  +   +G    A+P+
Sbjct: 859  PLVLMITAYGRDELARSAGESGLQGIEEILIKPVSPSQLFNTVMRILDHEDGPHSAADPE 918

Query: 1277 PRSQRL-LAGLTLLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAV 1335
                   LAGL +L+VEDNQLN+EV  E L      V +A+ G   + +V      +D +
Sbjct: 919  ALPDLAPLAGLRVLLVEDNQLNQEVASEFLAGANMVVDVADDGASALEKVRQ--QRYDVI 976

Query: 1336 IMDMQMPDIDGLEATRRIRADGRFDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQ 1395
            +MDMQMP +DG+ ATR IR       LPILAMTANA + D++ CL AGMN H++KP+D +
Sbjct: 977  LMDMQMPVMDGIAATREIRRQFPAAVLPILAMTANAMEQDRERCLAAGMNDHIAKPVDPR 1036

Query: 1396 QLLPNILRLVGRD----AAQFAEPESMHLDAQHNLEGETLLD----------DIRLILRR 1441
             LL  +L+ +       A Q A P    +     +      D          D  L L +
Sbjct: 1037 DLLGKLLKWLAPGAPLVAPQAAAPLPGTVTPTPPVAAPAKADRQPFAGIPGLDATLGLHQ 1096

Query: 1442 FGGNQVFFEKMASSFAPEMIKQLSLFKQSTKTFDYATTAAISHAIKGIASNFGARRLAVH 1501
                +  + ++   F            ++    D+      +H +KG+++  GA  L   
Sbjct: 1097 ALDREGLYLRLMDKFVSGQRDAPQRLARAIDAGDWVGAEREAHTLKGVSAQIGAMPLRDL 1156

Query: 1502 AAFLEKQFKQEGLELLEIKRWTDTLESLINQSIEQLSGFLPK-TQLKQSQSSESANGVVD 1560
            A  LE   +Q        +   D L+ L+ +  + L   +     +  +Q   +A   V+
Sbjct: 1157 AEGLEHAIRQ--------RDPPDLLQDLLGKIADSLPPLVDAIAAVLATQEVPAAKATVN 1208

Query: 1561 IQSVRAELDNLASLLQENNLEAVTLVDKLAKPL--SQHPQWTELNGQVQSLAFMQALETL 1618
               V      LA  L  ++     L+D+    L  +    +  L   V+   F QA   L
Sbjct: 1209 WMQVEEVCARLAQQLANDDFACEKLLDEHEALLHGALGEDFPPLARAVRDFDFTQAQARL 1268

Query: 1619 RAM 1621
            +A+
Sbjct: 1269 QAL 1271