Pairwise Alignments

Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 783 a.a., sensory box sensor histidine kinase/response regulator from Marinobacter adhaerens HP15

 Score =  267 bits (682), Expect = 4e-75
 Identities = 171/543 (31%), Positives = 286/543 (52%), Gaps = 25/543 (4%)

Query: 875  DITAQRQLEKTLRNAKQEADTANAAKSAFLANMSHEIRTPMNAVLGMLQLMQYTALSVQQ 934
            D  + RQ     +  + EA  AN AK+ FLAN+SHE+R P+ +VLG   L+  T L  +Q
Sbjct: 232  DTRSLRQTTIQSQGERDEAVRANHAKNQFLANVSHELRIPLQSVLGYANLLTDTPLDQEQ 291

Query: 935  QGYVTKAQTAAKSLLGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDLAVVLSANHGNSD 994
            + YV    +A++SL  ++ND+LD S ++AGKL L+  P  +   + DL  +L +      
Sbjct: 292  REYVLTLLSASESLSAIINDLLDISSMEAGKLVLEDIPFDLRETLNDLVHMLGSRAREKG 351

Query: 995  VEVMFDLDSALPAWLLADQLRLQQILINLAGNALKFTPHGQVIVGLECLRHEAESVTVQF 1054
            + +   +D  LP  L  D +R++QIL+NL  NA+KFT  G V++ +E L    +   ++ 
Sbjct: 352  LALELRIDENLPWALKGDPVRIRQILLNLTSNAIKFTDSGHVLISIEVLGRRDDKARLRI 411

Query: 1055 SIVDSGIGISEEQIERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQLQVTSKVG 1114
            ++ D+G+GI+ E +  ++  + Q      R+  G GLGL I ++LV LM G + + S+ G
Sbjct: 412  AVEDTGVGINPEDVPLVYEPYVQLGQQFQRQLPGAGLGLTICRQLVGLMDGSMDLESRPG 471

Query: 1115 VGSRFWFDLTFPVM-EVEANPRAD---LSGYRILVVDDNQITTEILSKILSDYGCVVETA 1170
             GS FW +LT PV  E  A  R D   +   RILVVD  +++ +I  ++LS +   +E  
Sbjct: 472  EGSTFWMELTLPVAPENAARVRPDTRMVKNRRILVVDSYELSRKITLEMLSRHEVHIEAV 531

Query: 1171 SGGYQAIEKVKQATANAQQFDVVLMDWRMPDIDGLQTAEMLKNAGTGSYTPLVVMLTAYG 1230
                +A+  ++ A    Q FD +++D  +PD+D       +++    S   L+++ +   
Sbjct: 532  KSAGEALTSLRTAFDGHQPFDAIILDGFVPDMDSDLLCRQIRSNPLWSDMRLLILSS--- 588

Query: 1231 HEVIAESQHINNVPFVNFLTK--------PVTSQILAEAVLNAIEGKT----MDANPKPR 1278
            +    +++H        FL+K        P+ +Q+ A+A        T           R
Sbjct: 589  NPQRGDAEHFRQAGADAFLSKSLRESCLTPILNQLFADAAKEERRFLTRFSLQATTDTAR 648

Query: 1279 SQRLLAG-LTLLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIM 1337
             + L  G + +L+VEDN +NR +   LL   G  V+ A  G    +  L     FD V M
Sbjct: 649  RRELPCGRMKVLLVEDNPVNRTLTRRLLEKLGCDVMTANDGEAAAS--LWQWHPFDLVFM 706

Query: 1338 DMQMPDIDGLEATRRIRADGRFD---QLPILAMTANASQADKQECLEAGMNAHVSKPIDM 1394
            D  MP +DG EATRR+R   +     ++P++A+TA+A + D++ C   GM++ V+KP+++
Sbjct: 707  DCVMPRVDGFEATRRLREWEKTHNRARIPVVALTASAMEEDEERCRRCGMDSFVAKPVNI 766

Query: 1395 QQL 1397
            + L
Sbjct: 767  EML 769



 Score = 57.0 bits (136), Expect = 8e-12
 Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)

Query: 1281 RLLAGLTLLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQV---LDSGDMFDAVIM 1337
            R++    +LVV+  +L+R++  E+L+     +   +   E +T +    D    FDA+I+
Sbjct: 497  RMVKNRRILVVDSYELSRKITLEMLSRHEVHIEAVKSAGEALTSLRTAFDGHQPFDAIIL 556

Query: 1338 DMQMPDIDGLEATRRIRADGRFDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQQL 1397
            D  +PD+D     R+IR++  +  + +L +++N  + D +   +AG +A +SK +    L
Sbjct: 557  DGFVPDMDSDLLCRQIRSNPLWSDMRLLILSSNPQRGDAEHFRQAGADAFLSKSLRESCL 616

Query: 1398 LPNILRLVGRDAAQ 1411
             P IL  +  DAA+
Sbjct: 617  TP-ILNQLFADAAK 629