Pairwise Alignments

Query, 582 a.a., flavocytochrome c (RefSeq) from Shewanella sp. ANA-3

Subject, 596 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) from Xanthomonas campestris pv. campestris strain 8004

 Score =  111 bits (278), Expect = 7e-29
 Identities = 126/481 (26%), Positives = 211/481 (43%), Gaps = 90/481 (18%)

Query: 129 TEYTYDVVVIGSGGAGFSAGLEAMAAGRTAVIIEKMPIVGGNSLISGAEMNVAGSWVQKN 188
           TE+ YD+VV+G+GGAG  A       G   V + K+     +++ +   ++ A      N
Sbjct: 7   TEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAALG----N 62

Query: 189 MGITDSKELFISDTLKGGDFKGDPEMVKTMADNAVEAAEWLRDYVKVEFYPDQ---LFQ- 244
           MG  D +  F  DT+KG D+ GD + ++ M   A+ A   L  Y  V F   +   ++Q 
Sbjct: 63  MGEDDWRYHFY-DTIKGSDWLGDQDAIEYMCREAIPAIIELEHY-GVPFSRTEEGKIYQR 120

Query: 245 -FGGHSVK--------RALIPKGHTGAEVISKFSIKAEEVGLPIHTNTKAERLLQDQTGR 295
            FGG + K        R       TG  ++     ++            A  L+ D+ G 
Sbjct: 121 PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV 180

Query: 296 VVGVEATHNGK-TITYHAKRGVIVATGGFSSNMEMRKKYNPELDERYGSTGHSGGTGDGI 354
             GV A    + ++      GV++ATGG+       + Y       + +T     TGDG 
Sbjct: 181 CRGVLALDMAEGSLHLFRAHGVVLATGGYG------RAY-------FSATSAHTCTGDGG 227

Query: 355 VMAEQIHAAAKNMGYIQSYPICSPTSGAIALIADA-RFFGAVLINQKGERFVE------- 406
            +  +     ++M ++Q +P  +   GA  LI +  R  G +L N  GERF+E       
Sbjct: 228 GLVMRAGLPMQDMEFVQFHP--TGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYK 285

Query: 407 ELERRDVISQAILGQPGRYTYVLWNQAIEDVAHTVEMHQGELKEFTKDGLMHKVDTLEEA 466
           +L  RDV+S+++                     T+E+ +G      KD ++  +D     
Sbjct: 286 DLASRDVVSRSM---------------------TIEIREGRGVGEHKDHIL--LDLTHLG 322

Query: 467 AKVFNIPEEKLLATIKDVNHYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGL 526
            +V N   +KL    +  + +A              VD++K P  +L   P+VH+ MGG+
Sbjct: 323 PEVIN---DKLPGIAESAHIFAG-------------VDVAKQPIPVL---PTVHYNMGGI 363

Query: 527 VVDTQTRVLDEKGN----IIPGLFAAGEVTGLT-HGTNRLGGNAYTDIIVFGRIAGQEAA 581
             +    V+ ++G+    ++PGL+A GE   ++ HG NRLG N+  D++VFGR      A
Sbjct: 364 PTNYHGEVVRKQGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVANRCA 423

Query: 582 K 582
           +
Sbjct: 424 E 424