Pairwise Alignments

Query, 653 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 712 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  236 bits (601), Expect = 3e-66
 Identities = 134/348 (38%), Positives = 217/348 (62%), Gaps = 2/348 (0%)

Query: 307 LIAILLSAFITVIVTQSLLRTIREVVALLNEIADGEADLTQRLPVNGHDELTQLAKNFNR 366
           L+   +   +  +V   + R ++++VA+L++IA GE DLT+RL  +  DEL  +A+ FN 
Sbjct: 366 LVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFNT 425

Query: 367 FVLRIQQLVAEVKDTTVQMVSASTQLNS-VTHSATQDMSSQQNETQLVASAITEMAASAV 425
           F+ ++Q ++ +V  T+VQ VS S++  + +     Q +  Q +E   VA+A+ EM A+A 
Sbjct: 426 FLSKLQGMITQVV-TSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQ 484

Query: 426 EVAASADTANKLSEDAKAQALLGRETVTRATHSMRELASKVEASATTIEQLRNDSDKIGA 485
           +VA +A  A + +  A   A  G + V   + S+  LA ++  +   ++ L  DS+ I A
Sbjct: 485 DVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINA 544

Query: 486 VLDVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQESTKQIQQIIQT 545
           +L  IR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ++T++IQ +IQ 
Sbjct: 545 ILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQAMIQQ 604

Query: 546 LQDRSGSAATMMGQSREATNSTVEQVTQVESALSTITEMVMSITHSVSQMAHAAEQQSTV 605
           LQ  +     +M  S+  T+ +V+   +   AL TIT+ V  I    +Q+A AAE+QS V
Sbjct: 605 LQQGTRDVVRVMEDSQHRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAV 664

Query: 606 VEEINMSINSVNDSANRTLTGVKQAASSANGLLGIGQQLDGLVSEFKV 653
            ++IN ++ ++   AN   +G  ++++++ GL  + +Q   L+++F+V
Sbjct: 665 ADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712