Pairwise Alignments

Query, 154 a.a., formate-dependent nitrite reductase (RefSeq) from Shewanella sp. ANA-3

Subject, 304 a.a., decaheme cytochrome c (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 66.6 bits (161), Expect = 3e-16
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 13/128 (10%)

Query: 34  SDACMKCHKRNGQMLGH----HGQDAMK-----MICSSCHGEKGDHPKKPNDLVVFGLNE 84
           +D C+ CHK++ ++       HG    K     + C +CHG +G H  K   ++ FG   
Sbjct: 45  ADTCLTCHKKDEKVSSFFNSAHGISNQKGPMAGLQCETCHGPQGKHRGKNEPMITFGEQG 104

Query: 85  ASETTVQLQACQKCHRPAKLSSQEWTHNVHAQKVACAACHKLHSPTEPMADMTPKVRSEL 144
             +   Q   C  CH+    S  +W HN   Q+ AC++CH +H+  +P+       ++++
Sbjct: 105 NIDINKQNGICLSCHKNEMQS--DW-HNAAHQQQACSSCHNIHAEVDPIL-ANAVSQNKV 160

Query: 145 CRNCHTGQ 152
           C +CH  +
Sbjct: 161 CADCHQAE 168



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 21/119 (17%)

Query: 37  CMKCHKRNGQ---MLGHHGQDAMKMICSSCHGEKGDHPKKPNDLVVFGLNEASETTVQLQ 93
           C  CH+       M   H     +M C++CHG  G       DL+   +N         Q
Sbjct: 161 CADCHQAESHQTLMRSSHPLTNGQMTCTACHGAHG--TINDVDLIKNNIN---------Q 209

Query: 94  ACQKCHRPAKLSSQEWTHNVHAQKVACAACHKLHSPTEPMADMTPKVRSE-LCRNCHTG 151
            C  CH   K     W H        C  CH  H       D   K R+  LC+ CH G
Sbjct: 210 TCYTCHAD-KRGPLLWEHAPVVDD--CTHCHNAHGSVN---DNLLKTRAPLLCQQCHNG 262



 Score = 26.9 bits (58), Expect = 3e-04
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 7/65 (10%)

Query: 35  DACMKCHKRNGQMLGHHGQDAMKMICSSCHGEKGDHPKKPNDLVVFGLNEASETTVQLQA 94
           D C  CH  +G +  +  +    ++C  CH     +P    D  + G N  + +     +
Sbjct: 231 DDCTHCHNAHGSVNDNLLKTRAPLLCQQCH---NGNPHAAVDQGIAGTNVFNSS----GS 283

Query: 95  CQKCH 99
           C  CH
Sbjct: 284 CLNCH 288