Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  326 bits (836), Expect = 2e-93
 Identities = 217/633 (34%), Positives = 325/633 (51%), Gaps = 35/633 (5%)

Query: 9   KILISVVIALSLVISLLSWQSYSSQKSLLLQNSLEQVQRLGEQQAERIQEWLAGRQDIVG 68
           KIL++  + +    SL +  +   Q++ +  N    +  +G+  A  IQ WL+GR  +V 
Sbjct: 10  KILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGRILLVE 69

Query: 69  ALASKVEDNSLSA-----LQQAQASGRFQLTYYGTETGQMLDSDPSIDRTGYDPRTRPWY 123
           + A  +  +   A     L+Q   +  F  +Y G + G  L          YDPR RPWY
Sbjct: 70  SAAQSIGSDDAEARVAELLEQKALASTFMFSYLGGQDGSFLMRPAEEMPADYDPRARPWY 129

Query: 124 KQAMNERGLILTKPYVDVAYNVLVVTMAQATSQ-----GVVGGDLSIASLVESVNRMTLP 178
           K A+   G  LT+PYVD A   LV+++A    Q     GVVGGDL +  LVE +N +   
Sbjct: 130 KDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALDFN 189

Query: 179 ANGYAIMMHKDGTVIAYKDASKAMKPVGQIDNDLNHDLPQQSRQAGTLLPMYFENEGRDK 238
             G+A ++  DG ++ + D SK MK +G++       L     +A        E +G+ +
Sbjct: 190 GMGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSLDANYSEA--------ELDGQTR 241

Query: 239 L-----VWGVDIPNTDWELVIVLDKETLEAPLTDLLLTQFGLSAVVLLLS-----VLAIS 288
           +     V G  +P+  W + I LDK    A L       F  SAVV  L+     +L + 
Sbjct: 242 ILSFSRVQG--LPSVSWYVGISLDKAKAYAALAS-----FRTSAVVAALTAVGVILLLLG 294

Query: 289 WLVNLLLGPLGRVSQALARIADGNGDLTQRIEVDTQDEVGVLADSFNRFVGSQHQLISHI 348
            L+ +L+ PL  + +A+A IA+G GDLT+R+ V ++DE G LA +FNRFV   H  I  +
Sbjct: 295 MLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREV 354

Query: 349 RQLASELDADAERSLKTNHIAVAELQRQQQEVAMVATAVTEMASATNEIAANAENTATAA 408
                +++  A R L  ++ ++A    Q      VA A+ E+ +A  EIA NA + +  A
Sbjct: 355 SSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQA 414

Query: 409 QQSAASSFQGKELVNKTRSSINSLADEVAQATDVIEDLSRHAQSISSILATIQGIAEQTN 468
             +   +  G+++V +  +++  L+ +++ +   IE L+     I  IL  I+GI+EQTN
Sbjct: 415 SGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTN 474

Query: 469 LLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLME 528
           LLALNAAIEAARAGE GRGFAVVADEVR L+ RTQ S QE+   IE LQ     +V  M 
Sbjct: 475 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMT 534

Query: 529 SSQMLAGNSVEDANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKD 588
            SQ  + +SV  A+ A + L E+TQ +  I  M   +ATA EEQT V   +  +   I  
Sbjct: 535 ESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINT 594

Query: 589 VTDEITEAAKSDLTQAQALKARANDLNAQVATF 621
           +  +  E  +S L     L  +A  L   V +F
Sbjct: 595 LNQQGVENLQSTLRACGDLDQQARRLKQLVDSF 627