Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  320 bits (820), Expect = 1e-91
 Identities = 208/605 (34%), Positives = 329/605 (54%), Gaps = 28/605 (4%)

Query: 9   KILISVVIALSLVISLLSWQSYSSQKSLLLQNSLEQVQRLGEQQAERIQEWLAGRQDIVG 68
           KI+ +  + L   ++LLS   Y   +  +     + V  + +  ++   E + GR+ I  
Sbjct: 6   KIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGRKSIAQ 65

Query: 69  ALASKVE-----DNSLSALQQAQASGRFQLTYYGTET-GQMLDSDPSIDR-TGYDPRTRP 121
              S +E     DN  + + Q      F L  +G E  G  +++DPS +    +DPR RP
Sbjct: 66  YATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDPRVRP 125

Query: 122 WYKQAMNERGLILTKPYVDVAYNVLVVTMA-----QATSQ--GVVGGDLSIASLVESVNR 174
           WYK A N   L++T PY D A   ++V++A      AT Q  G +  D+S+A L E VN 
Sbjct: 126 WYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAELVNE 185

Query: 175 MTLPANGYAIMMHKDGTVIAYKDASKAMKPVGQI--DNDLNHDLPQQSRQAGTLLPMYFE 232
           + L   GY  ++ +DGT IA+       KP+ +   ++ +N D  Q              
Sbjct: 186 VKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDTHQVIIN---------- 235

Query: 233 NEGRDKLVWGVDIPNTDWELVIVLDKETLEAPLTDLLLTQFGLSAVVLLLSVLAISWLVN 292
             G+   V   D+   DW + +V+D+E   A L +L  +    + + L++SV  + ++V 
Sbjct: 236 --GKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVR 293

Query: 293 LLLGPLGRVSQALARIADGNGDLTQRIEVDTQDEVGVLADSFNRFVGSQHQLISHIRQLA 352
           +L+ PL  ++ A+  +A G GDLTQR+  +T +E   LA  FN F  +  + +   + + 
Sbjct: 294 VLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIG 353

Query: 353 SELDADAERSLKTNHIAVAELQRQQQEVAMVATAVTEMASATNEIAANAENTATAAQQSA 412
           +E+   +E +  T   +   ++ Q  E+  +ATA+ EMA+ ++++A NA+  A+AA+ + 
Sbjct: 354 AEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVAD 413

Query: 413 ASSFQGKELVNKTRSSINSLADEVAQATDVIEDLSRHAQSISSILATIQGIAEQTNLLAL 472
            ++  G ++V KT  +I++L+  +  A D ++ L     +I ++L  I  IA+QTNLLAL
Sbjct: 414 DAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLAL 473

Query: 473 NAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLMESSQM 532
           NAAIEAARAGE GRGFAVVADEVR L++RTQ ST E+   IE LQ         M  S+ 
Sbjct: 474 NAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKD 533

Query: 533 LAGNSVEDANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDE 592
            A ++V  A  A +ALE+I  A+  ISDM  QIA+AAEEQ+ V  EI  NTV IKD++D+
Sbjct: 534 TAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQ 593

Query: 593 ITEAA 597
           + E+A
Sbjct: 594 VAESA 598