Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 560 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  236 bits (603), Expect = 1e-66
 Identities = 138/358 (38%), Positives = 219/358 (61%), Gaps = 5/358 (1%)

Query: 175 EALLLGLILVAIVASLLSA---LFMSRRLVNIVHQIKRVVEHLA--DGDLTQKTQISGQN 229
           E +LL ++ VA V  L+ A   LF++  ++  +H +K  ++ +A  +GDLT++  I+ Q+
Sbjct: 203 EGVLLSIVGVAAVVLLVIAAVGLFVANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQD 262

Query: 230 ELCALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVT 289
           EL  L    +R +D +  ++  I + +  ++  + Q++ Q+  +  A++    ETDQV T
Sbjct: 263 ELGELAGSFNRFVDKIHSLVRQITEMTSQLTGLVNQVSDQAQRSDQAMERQRHETDQVAT 322

Query: 290 AMTEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAE 349
           A+ EMSA A  VA  A  AA   QQ +E+   +K+ V  + + + ALV  + ++  ++  
Sbjct: 323 AINEMSAAAQEVAKSAQGAAVAAQQTDEEGQAAKRVVAGSISQIHALVKDIRSSGVSLDS 382

Query: 350 MNENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAS 409
           + ++   I ++L VI  IADQTNLLALNAAIEAARAGE GRGFAVVADEVRALA+RTQ S
Sbjct: 383 LQQDVSSIVSVLGVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQS 442

Query: 410 TAEINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQI 469
           T EI  M++RL+ G  SAV+AM  + ++    +        SL+T+   +  IN ++ QI
Sbjct: 443 TQEIQGMIDRLQAGTQSAVDAMRRSSEAGDGTSAQANQAGASLDTMAQLIGTINSMNAQI 502

Query: 470 ATAAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527
           A+AAEEQ+AV+EEINR+++ I   V+ +    +    ++ SLA   ++L  +V  FR+
Sbjct: 503 ASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 560