Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (565), Expect = 3e-62
 Identities = 131/366 (35%), Positives = 208/366 (56%), Gaps = 4/366 (1%)

Query: 163 LGKQAEDKVNATEALLLGLILVAIVASLLSALFMSRRLVNIV-HQIKRVVEHLADGDLTQ 221
           L ++ +  +  + A+ L L+++ +V   ++   +  R +N + H +  + E   D DL++
Sbjct: 177 LDQEVDRNIMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAE---DEDLSR 233

Query: 222 KTQISGQNELCALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHA 281
              I  ++E+ A+G   +R+I   RH +  +A  +  ++D   +++  +     A+    
Sbjct: 234 SVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQR 293

Query: 282 VETDQVVTAMTEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVD 341
            ETD V +AM EMSAT   VA +A   A  +  A+ ++    K   +A + +  L+ +++
Sbjct: 294 SETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIE 353

Query: 342 TAAHTIAEMNENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRA 401
            AA  I  +  ++  I  +L VI  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR 
Sbjct: 354 KAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT 413

Query: 402 LAARTQASTAEINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFD 461
           LA+RTQ ST EI  M+E+L++G  +AV AM E +   +  +       +SL  + T V  
Sbjct: 414 LASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGT 473

Query: 462 INGLSNQIATAAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGV 521
           IN ++ QIATAAE+QSAV+EEINRN++TI  + +  +     T   +  L     +L  +
Sbjct: 474 INEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRL 533

Query: 522 VSHFRL 527
           V  F+L
Sbjct: 534 VGQFKL 539