Pairwise Alignments

Query, 439 a.a., putrescine transporter (RefSeq) from Shewanella sp. ANA-3

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (292), Expect = 1e-30
 Identities = 109/439 (24%), Positives = 199/439 (45%), Gaps = 38/439 (8%)

Query: 1   MSKSANKIGVVQLTIITIVNMMGSGIIMLPTQLA---QVGTISILSWLVTAAGSTALAYA 57
           MS +  K+ +  L  + + +M+G GI  LP  +A    VG + ++ W +TA G   LA+ 
Sbjct: 1   MSDTPGKLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAV-LIGWAITAVGMLTLAFV 59

Query: 58  FAKCGMFSKK---SGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVA---IAISAVGYAA 111
           F    + ++K    GG+  YA+  FG    F + + Y +S  + NV    +  S +GY  
Sbjct: 60  FQT--LANRKPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFF 117

Query: 112 VLLEVNLSPMAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWF 171
            +     +  A+  +++ +LW        G +    ++ VT    ++P++   LI  F F
Sbjct: 118 PVFGEGNTVAAVIGSSV-LLWAVHFLVLRGIKEAAFINLVTTIAKVVPLVLFVLIAVFAF 176

Query: 172 DIDLYK----GAWNPHDMPFFKALGGSIAMTLWAFLGLESACANSETVDNPEKNVPIAVM 227
            +D++     G  NP        +   + +T+W F+G+E A   S   +         V+
Sbjct: 177 KLDIFTADIWGLKNPDLGSVLNQVRNMMLVTVWVFIGIEGASIFSARAEKRTDVGKATVI 236

Query: 228 GGTLGAALIYIVSTNVIA-GIVPNADLANSNAPFGLAFAQMFNPVVGK----IVMACAII 282
           G      L+++V  NV++ GI+   +LA    P   + A +   VVG     ++    II
Sbjct: 237 GFI--TVLLFLVLVNVLSLGIMTQPELAKLQNP---SMAAVLEHVVGHWGAVLISVGLII 291

Query: 283 SCTGSLLGWQFTIAQVFKASADEGFFPKVFSKVSKADAP---IWGMTIIVSIQTLLSLMT 339
           S  G+LL W    A++  A+A +   P+   + +    P   +W    +V +  +++L +
Sbjct: 292 SLLGALLSWVLLCAEIMFAAAKDHTMPEFLRRENANHVPANALWLTNAMVQLFLVITLFS 351

Query: 340 ISPSLSKQFEALVNLAVVTNIVPYILSMA---ALGVMQKQLKVPANKARVANVIAVIGAL 396
            S  LS     L+ LA    +VPY+ S A    L V  +  +  A + R   +I  +  +
Sbjct: 352 ASTYLS-----LIYLATSMILVPYLWSAAYAVLLAVRGETYEGFAAERRKDLIIGAVALI 406

Query: 397 YSFYALYSSGETAVMLGAI 415
           Y+ + LY+ G   ++L A+
Sbjct: 407 YAVWLLYAGGIKYLLLSAL 425