Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 555 a.a., AMP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  446 bits (1148), Expect = e-130
 Identities = 234/559 (41%), Positives = 339/559 (60%), Gaps = 14/559 (2%)

Query: 1   MDNAIKTPVEMLAHWANTRGDEIYLRQPIKGQYLD-FTWNEVQEKVQQLAGALRHLGLEP 59
           M  A + P+++          + +L QP+ G  ++  TW +V  + +  A  LR   L  
Sbjct: 1   MSAAFRLPLQVFYEREARHPRQRFLVQPMGGGQVETLTWADVGHQARCAAHWLRARELPQ 60

Query: 60  GDKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHW 119
           G  IA++SKNCA W I DLA+   G++SVP+YP    D++  VL+HS A   F+GKLD W
Sbjct: 61  GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAQVLEHSEAALAFIGKLDDW 120

Query: 120 ADQEAGVGGELLRLAMPYETMPA---QYQWEQLLKMGNPLIEAPLPELDQTMTLIYTSGS 176
                GV  +L  +++P    PA    + W  L +  +P+ + P P+ DQ  T+IYTSG+
Sbjct: 121 PGMSRGVSADLPTISLPL--CPAGGFDFSWADLQR-SSPIQDDPTPDADQLATIIYTSGT 177

Query: 177 TGQPKGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVA 236
           TG PKG + +F + G+      +    N +DRLLSYLPL H+ ER+ +E +S Y+G TV 
Sbjct: 178 TGLPKGVMHSFGNLGFATTHGTQLFGLNESDRLLSYLPLCHVAERMFVELASIYTGQTVF 237

Query: 237 FVESLDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVGKLNLLLKIPLISSLVKHKI 296
           F ESLD+F++D+QRA+PT  F VPR+WS FQ  +  KI   +L+ LL +P+I   V HK+
Sbjct: 238 FAESLDTFLSDLQRARPTALFGVPRIWSKFQMGVYSKIPAKRLDFLLGLPIIGKRVGHKV 297

Query: 297 HKGLGLNHCRLLGSGSAPIPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGT 356
             GLGL+  R+  SG+AP+P +L+HWY  +GL++ E +GMTENC YS I  P    K G 
Sbjct: 298 LAGLGLDALRIALSGAAPVPQALLHWYQRLGLEVLEVYGMTENCGYSHICLP-GQNKPGW 356

Query: 357 VGKPVQDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCV 416
           +GKP  + ++R  + GE+L++S   M  Y+ +P+ TA     DGF  TGD    DA+G +
Sbjct: 357 IGKPCPEVEVRIEDSGEVLVRSGATMLGYFKEPQKTAETITKDGFLRTGDKGEQDAEGNL 416

Query: 417 TITGRVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLS----EGA 472
            +TGR+K+ FKT+KGKYVAP PIE +LA    +E +CV+G GL  P+ L  LS    + A
Sbjct: 417 RLTGRLKEIFKTSKGKYVAPAPIENRLAVHSRIEQVCVVGDGLSAPLGLCVLSAVGLQDA 476

Query: 473 TLQAREEVRTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKA 532
              AR  +++SL++ LD VN  L+ HE +  +VVV + W +EN  LTPTLKIKR+V+E  
Sbjct: 477 ASVARNALQSSLESLLDEVNGALDKHERLRQLVVVKDSWAVENGFLTPTLKIKRNVIEAV 536

Query: 533 FSERVD--GIRGAQVRWED 549
           +  R +    R   V W+D
Sbjct: 537 YGARFEEWSARSEAVLWQD 555