Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 598 a.a., long-chain fatty acid--CoA ligase from Rahnella sp. WP5

 Score =  197 bits (500), Expect = 1e-54
 Identities = 161/570 (28%), Positives = 251/570 (44%), Gaps = 83/570 (14%)

Query: 37  TWNEVQEKVQQLAGALRHLGLEPGDKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANT 96
           TW E+ EKV  L+  L    +   ++IA+   N   W   DLA++    ++VP+Y T   
Sbjct: 39  TWRELGEKVDALSDVLLQEQVGVQERIAICGNNSMAWATADLAILQLRAVTVPVYATNTP 98

Query: 97  DTIRYVLQHSGAKAIFLGKLDHWADQEAGVGGELLRLAMPYETMPAQYQWEQLLKMGNPL 156
               YVL  +  + +F+            VG +    A+    +  Q +   +L     L
Sbjct: 99  AQSAYVLNDADVRILFV------------VGQKQYDAAVAVRDLCPQLKHILVLDNDVDL 146

Query: 157 IEAPLP------------------------ELDQTMTLIYTSGSTGQPKGAIQTFASYGW 192
              P+                         +L    TLIYTSG+TG+ KG +  + S   
Sbjct: 147 RGVPIARHVSGVVPRDAALAAEREVRVNARDLSDLFTLIYTSGTTGEAKGVMLDYRSMAT 206

Query: 193 TCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVAFVESLDSFVADVQRAK 252
                 R L  + +D  L +LPLAH+ ER A      + G+   F+   D     +Q  K
Sbjct: 207 QLMQHERRLSISEHDVSLCFLPLAHVFER-AWSFFVMHCGAQNVFLRETDLVRDALQVIK 265

Query: 253 PTVFFSVPRLWSLFQKNIIDKI---------------GVGKLNLLL-----KIP------ 286
           PTV  +VPR +      I DK+               G GK   L+     + P      
Sbjct: 266 PTVMCAVPRFYEKVFSAIHDKVSRAGTLKKRLFHWAVGQGKEKFLIERRGERYPFWLAPA 325

Query: 287 --LISSLVKHKIHKGLGLNHCRLLGSGSAPIPPSLIHWYHSIGLDICEAWGMTENCAYSI 344
             L   LV  K+   LG N  R L +  A +  ++I ++ S+GL I   +G+TE CA ++
Sbjct: 326 HFLADKLVLKKLRDLLGGN-LRFLPAAGASLDDNVILFFESLGLKIKYGYGLTETCA-TV 383

Query: 345 INYPFDVRKIGTVGKPVQDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDPDGFFHT 404
             +  +  + G+VG  + + ++R GE+ E+ ++ P L+  Y+ +PE TAA+F  DG+F T
Sbjct: 384 TCWEENDFRFGSVGTALPEIEVRIGEENEIQVRGPTLLRGYFNKPEETAASFTADGWFKT 443

Query: 405 GDLCAIDADGCVTITGRVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVA 464
           GD   +DA G V IT R+KD  KT+ GKY+AP  IE  L QD ++E   VI        A
Sbjct: 444 GDAGKMDAQGNVFITERLKDLMKTSGGKYIAPQRIEGTLVQDRYIEQAAVIADERHFVSA 503

Query: 465 L----------------VQLSEGATLQAREEVRTSLKATLDSVNPHLESHEHVDAIVVVN 508
           L                +     A L   E++ +     L  +   L   E V   V++ 
Sbjct: 504 LIVPDFDVLNVYAQAHRIDYFNRAGLVKNEQILSLFAHQLREIQHDLAGFEQVKKFVLLT 563

Query: 509 EPWTIENDVLTPTLKIKRHVLEKAFSERVD 538
           +P+T+E   LTPTLK++R  +   + + +D
Sbjct: 564 KPFTMEAGELTPTLKLRRKNIFSRYQKEID 593