Pairwise Alignments

Query, 449 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

Subject, 427 a.a., Membrane protein involved in aromatic hydrocarbon degradation from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (487), Expect = 2e-53
 Identities = 131/420 (31%), Positives = 198/420 (47%), Gaps = 42/420 (10%)

Query: 1   MQKRLLTLAVTAALLSTTTQVQAAGFQLAEYSATGLGRAFAGEAAIADNASVQGRNPAML 60
           M K L    +  AL   ++Q+ AAGF L E S +G+G  FAG ++ AD+AS    NPA +
Sbjct: 4   MTKALNRTTLGLALGLASSQLLAAGFALNEQSISGMGTGFAGRSSSADDASTVFGNPAGM 63

Query: 61  TYLEGRQLSAGGIYVMPNVDVKGDVSLSSPLLGPNPVEMKGGDALDVADDALVPNFYYSN 120
           + ++  Q+S G   V+   D+           G N      GD + V     VP  YY  
Sbjct: 64  SRIKREQISVGAAAVIAKTDIDNGRGTFG---GSND-----GDMVPVVG---VPMGYYVK 112

Query: 121 QLNDQWTWGLAVNSNYGLSTELPKTHAAAIFGNKTAVTTVEFNPNIAYRVNDAVSVGGGV 180
            ++D W +GL V   +GL T+  K  A   +G+K+ V  V F P ++Y  ND VS+G G 
Sbjct: 113 PIDDHWAFGLGVYVPFGLVTDYEKGFAGRYWGDKSHVQVVTFQPTVSYAFNDKVSIGFGP 172

Query: 181 RIVYGEGEIGASLPGWVDRIKPALPAQVSAMLPPGGTELKSMKGDDIGYGWQLGTSWQIN 240
            I   +GE+ +              A ++A  P        ++GDD   G+  G   Q  
Sbjct: 173 TINRIDGELTS--------------ATLNAATPGRNDGKVKIEGDDTAIGFNAGILVQAT 218

Query: 241 PAHRVGLAYHSGVKLDLEG----HASGVIYDGGQNLSIEGYIPLELPAFAELSSYHQLTD 296
              R+GL YHS V   L+G      SG    GGQ    +  + +  P   + S   Q+ +
Sbjct: 219 DTTRLGLTYHSKVDYKLKGKTKIEGSGFGPFGGQKY--DASLDISTPESVDFSITQQIDE 276

Query: 297 NWAMHASVNWTDWSVF-------DQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGT 349
           NW ++A   WT WS         D + A   G   P G +     +E+++ D W  A+G 
Sbjct: 277 NWTVYAGSTWTRWSRLQDITVNNDGVPALLGGSAGPIGTI----TEEQNWHDTWAHAIGA 332

Query: 350 TYQVSNEWLVRAGVALDKTAATNEWRTTTIPDSDRLWFSVGAGYQATKNLNVDFALTYIR 409
           +Y+V+ EW +R G ++D++   N  R+  IP  DR   S GAG+  T +L +D A +Y+R
Sbjct: 333 SYKVNKEWTLRTGFSVDQSPTNNVNRSPRIPTGDRKIISFGAGWSPTDDLTIDVAYSYLR 392