Pairwise Alignments

Query, 449 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

Subject, 427 a.a., membrane protein involved in aromatic hydrocarbon degradation from Marinobacter adhaerens HP15

 Score =  166 bits (421), Expect = 1e-45
 Identities = 116/399 (29%), Positives = 193/399 (48%), Gaps = 29/399 (7%)

Query: 36  LGRAFAGEAAIADNASVQGRNPAMLTYLEGRQLSAGGIYVMPNVDVKGD---VSLSSPLL 92
           +G A AG AA  +NA+    NPA ++ L G  +S G   +  + + K      S ++P +
Sbjct: 1   MGTANAGAAANPENATTVLFNPAGMSQLSGTNISFGAAVLDIDAEAKESSIRTSRNNPSV 60

Query: 93  GPNPVEMKGGDALDVADDALVPNFYYSNQLNDQWTWGLAVNSNYGLSTELPKTHAAAIFG 152
              P    G    D+AD A++PNFY S+++N+    G  +++ YGL+ +     A   F 
Sbjct: 61  PVTPASSGG----DIADPAVLPNFYLSHEINESIDVGFGIHAPYGLAADYDNDFAGRFFA 116

Query: 153 NKTAVTTVEFNPNIAYRVNDAVSVGGGVRIVYGEGEIGASLPGWVDRIKPALPAQVSAML 212
           +KT +T + F P+++      +S+G G+ ++Y EG +              + AQV    
Sbjct: 117 DKTELTAIAFTPSVSLNNGQGLSMGVGLNVLYAEGRLSR---------YQDISAQVGTAA 167

Query: 213 PPGGTELKSMKGDDIGYGWQLGTSWQINPAHRVGLAYHSGVKLDLEG--HASGVIYDG-- 268
                     +GDD+G  +++G  +++  A ++GL   +G +L+LEG    SG+      
Sbjct: 168 LALEEPYADAEGDDVGMTFRVGFLYELTSATQIGLTLQTGTELELEGDLEISGITNPSNP 227

Query: 269 -GQNLSIEGYI--PLELPAFAELSSYHQLTDNWAMHASVNWTDWSVFDQL--VAYFPGEV 323
            G  LS    I  PL +P  A L   H LTDN  + A   +  WS F++L  V+   G  
Sbjct: 228 MGPTLSASESIKVPLAIPESATLGLRHSLTDNVTLLAGATYARWSRFEELDIVSTEAGGA 287

Query: 324 KPKGDLESDLVKE--EHFEDNWRFALGTTYQVSNEWLVRAGVALDKTAATNEWRTTTIPD 381
                 E  ++    E +E++W+   G  +Q S EW  +AG A D+ +  N++ T  IP 
Sbjct: 288 ISGAPQEGAVISHVTEQWENSWQINAGAIWQASPEWAFKAGYAWDE-SPVNQYVTARIPS 346

Query: 382 SDRLWFSVGAGY-QATKNLNVDFALTYIRATGDAPINEQ 419
           SDR W ++GA +  A     VD A+  +  T D  +N++
Sbjct: 347 SDRHWLTLGAQWADAQSGWTVDVAVGTLLFTDDPRVNDR 385