Pairwise Alignments

Query, 449 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

Subject, 377 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 36/242 (14%)

Query: 118 YSNQLNDQWTWGLAVNSNYGLSTELPKTHAAAIFGNKTAVTTVEFNPNIAYRVNDAVSVG 177
           +   L+D+    L ++   G     P+       G+K  +        + Y+ +   SV 
Sbjct: 79  FKTDLSDRLVAALVLDQPVGARIRYPEGTGHPFAGSKADLDARALTAMLRYKFDGGFSVY 138

Query: 178 GGVRIVYGEGEIGASLPGWVDRIKPALPAQVSAMLPPGGTELKSMKGDDIGYGWQLGTSW 237
           GG+R    EG +            P +P          G EL +   +D  +G+ +G ++
Sbjct: 139 GGLRAQQVEGFVAL----------PTIP----------GYELTT--NNDREFGYMVGAAY 176

Query: 238 QINPAH-RVGLAYHSGVKLDLEGHASGVIYDGGQNLSIEGYIPLELPAFAELSSYHQLTD 296
           +      RV L Y+S +  + E   S  +  GG  +  +G+    +P    L +   +  
Sbjct: 177 ERPEIGLRVALTYNSAIDHNFESSES-FLTPGGPAVLDDGF-KTTIPQSVHLEAQTGIAA 234

Query: 297 NWAMHASVNWTDWSVFDQLVAYFPGEVKPKGD------LESDLVK-----EEHFEDNWRF 345
           N  +  S+ W DWS F+     +   +   G        ESD +         F +NW  
Sbjct: 235 NTLLFGSIRWVDWSEFEIDPPVYAAGIASLGQDYALAAYESDTITYRIGVGRRFNENWAG 294

Query: 346 AL 347
           A+
Sbjct: 295 AI 296