Pairwise Alignments

Query, 449 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

Subject, 432 a.a., long-chain fatty acid transport protein precursor from Caulobacter crescentus NA1000

 Score =  170 bits (430), Expect = 9e-47
 Identities = 128/451 (28%), Positives = 206/451 (45%), Gaps = 35/451 (7%)

Query: 6   LTLAVTAALLSTTTQVQAAGFQLAEYSATGLGRAFAGEAAIADNASVQGRNPAMLTYLEG 65
           L + V    L   +Q  A+ F L E S  G GRA++GE A     S+   NPA +  +  
Sbjct: 8   LAVGVAFVALVAASQASASAFYLQEQSVRGTGRAYSGEVADKGVGSLWW-NPASIAGIAR 66

Query: 66  RQLSAGGIYVMPNVDVKGD-VSLSSPLLGPNPVEMKGGD--ALDVADDALVPNFYYSNQL 122
            +   G   ++ N +V     S++ P+         GG   A D  ++ +VPNF  + ++
Sbjct: 67  SEAHFGLNQILVNSEVTNTGSSITRPVPPAGLTTAVGGADAAFDPINNGIVPNFGAAWKI 126

Query: 123 NDQWTWGLAVNSNYGLSTELPKTHAAAIFGNKTAVTTVEFNPNIAYRVNDAVSVGGGVRI 182
           ND+ + GL+V + Y  +TE            K+ + TV     +AYRVND + +G GV  
Sbjct: 127 NDKLSLGLSVAAPYNFTTEYTANSWTRYDALKSQLRTVNVEGVVAYRVNDMLDLGLGVTA 186

Query: 183 VYGEGEIGASLPGWVDRIKPALPAQVSAMLPPGGTELKSMKGDDIGYGWQLGTSWQINPA 242
           +Y + E+  +LP             +S +   G   L+S+KGD   YG+ +G     + +
Sbjct: 187 MYADAELTNALPN------------ISPLQADG---LQSLKGDGFAYGYSVGAQLHPSKS 231

Query: 243 HRVGLAYHSGVKLDLEG--HASGVI--YDGGQNLSIEGYIPLELPAFAELSSYHQLTDNW 298
             +G +Y S +   L+G    SG++       N +++G   + LP  A L +   + D W
Sbjct: 232 LTIGASYRSKLDHKLDGTVKVSGLLAPIPAASNFTVDGQAKITLPWIANLGARWAVNDQW 291

Query: 299 AMHASVNWTDWSVFDQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVSNEWL 358
            ++ SV+   WS FD +   F G               + ++D   +A G  YQ S    
Sbjct: 292 TLNGSVSRVGWSEFDAIRVSFAG---------GGSTSPQDYKDVTTYAAGVDYQASPRLT 342

Query: 359 VRAGVALDKTAATNEWRTTTIPDSDRLWFSVGAGYQATKNLNVDFALTYIRATGDAPINE 418
           +RAGV  D T      RT  +PD DR+ ++ GA + AT+ L +D A++YI A   + IN 
Sbjct: 343 LRAGVQYDPTPTPEIGRTARVPDGDRMMYATGATWAATETLQLDAAISYI-AFDKSQINR 401

Query: 419 QQNLLNLATVSFNGEASGD--VWLAGIQMSY 447
                  +TV   G+  G   V  AG + S+
Sbjct: 402 TDVTATSSTVRLRGDVEGSAVVLAAGARFSF 432