Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 487 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Pseudomonas stutzeri RCH2

 Score =  378 bits (970), Expect = e-109
 Identities = 216/470 (45%), Positives = 284/470 (60%), Gaps = 9/470 (1%)

Query: 13  PYAGEQTFL-ELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQ 71
           P AG    + ELTLDSR +R GD+FLA+PG + DGR     A+A+GA AV    + + + 
Sbjct: 10  PQAGSDVLIRELTLDSRKVRGGDLFLAVPGLQFDGRDHAQDAIARGAAAVAYEAEGLVQP 69

Query: 72  GKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVT 131
                  + V +    LA Q+SA+A  R+     ++M +VG+TGTNGKTS SQL AQ + 
Sbjct: 70  ----LVGEAVMVPVQHLASQLSAIAG-RFYGEPSRNMRLVGVTGTNGKTSVSQLIAQALD 124

Query: 132 LLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQG 191
            L     ++GTLG G  G+L    +TT DAI +   L     +G    AMEVSSHGL QG
Sbjct: 125 RLGEPCGIIGTLGTGFHGQLELGRHTTPDAIGVQATLANLKQEGARAVAMEVSSHGLDQG 184

Query: 192 RVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLSE 251
           RV A+ FDVAVFTNL+RDHLDYHG ME Y  AK  LF    L   ++NLDD  G A   E
Sbjct: 185 RVAALDFDVAVFTNLSRDHLDYHGTMEAYGAAKARLFNVPGLRCRVINLDDGFGRALAGE 244

Query: 252 LANVPAKMWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLL 311
             +  +++  +S+E       Y   A+ +D G+ A L+ P+GE  +RSPLLG FN+SN+L
Sbjct: 245 --DRESRLITYSLE-DPSAYLYCAEARLDDDGIHARLITPQGERSMRSPLLGRFNVSNVL 301

Query: 312 AALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALR 371
           AA+ AL      +  + + +P L   AGRM+R    D+  +VVDYAHTPDA+E+ L ALR
Sbjct: 302 AAVGALLGMDYALDEILAVLPELEGPAGRMQRLGGGDHPLIVVDYAHTPDALEKVLTALR 361

Query: 372 RHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLT 431
            H  G L C+FGCGGDRD GKRPLM + AE+ AD I+VT DN R+E P +I+ DI  G  
Sbjct: 362 PHARGRLLCLFGCGGDRDTGKRPLMAEVAERLADGIVVTDDNPRNEAPERIVEDIRSGFV 421

Query: 432 HPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDE 481
           +P  A     R  AI  ++A A   DV++LAGKGHE YQE  G R  + +
Sbjct: 422 NPAAATFAHGRAQAIAGLIATAHAEDVVVLAGKGHEDYQEIRGERLPFSD 471