Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  409 bits (1051), Expect = e-118
 Identities = 225/493 (45%), Positives = 294/493 (59%), Gaps = 13/493 (2%)

Query: 4   LRDLLAPWF----PYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGAT 59
           + +L+APW     P         L LDSR I+ GD F+A+ GH VDGRQFIDKA+AQGA 
Sbjct: 24  ISELIAPWLELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGAN 83

Query: 60  AVLVHTDKIDEQGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGK 119
            VL   D     G V        IY  +L + +S +A   Y    G    ++G+TGTNGK
Sbjct: 84  LVLAEADAQHLNGWVEYRAGVPVIYLAELGQHLSELAGRLYG---GHHNQLIGVTGTNGK 140

Query: 120 TSTSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTC 179
           T+ +QL AQ + LL  KAAVMGT GNG    L  + NTT +A+ +   L + A++G    
Sbjct: 141 TTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYT 200

Query: 180 AMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVN 239
           A+E SSHGLVQGRV  + F   VF+NL+RDHLDYHG ME YA AK  LF   +  + ++N
Sbjct: 201 ALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIIN 260

Query: 240 LDDPVGAAWLSELANVPAKMWGFSI--EAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDI 297
           +DD VGA W+ +L        G S+  + +T  A + +   + + G+        GE ++
Sbjct: 261 VDDAVGAQWVKQLPQAI----GVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGEL 316

Query: 298 RSPLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYA 357
            +PL+G FN  NLL AL+ L   G +  AL +  P L PV GRME F       +VVDYA
Sbjct: 317 HAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYA 376

Query: 358 HTPDAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSE 417
           HTPDA+E+AL ALR HCAG+LW + GCGGDRD+GKRP+M   AEQ ADR+++T DN RSE
Sbjct: 377 HTPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSE 436

Query: 418 DPNQIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRH 477
            P  I+ D++ GLT+PERA  E  R  A  + +  A   D+ILLAGKGHE YQ  A    
Sbjct: 437 SPQAIVADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETI 496

Query: 478 DYDERALARQLSE 490
            Y +R  A+QL E
Sbjct: 497 HYSDRETAQQLLE 509