Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas syringae pv. syringae B728a

 Score =  367 bits (943), Expect = e-106
 Identities = 216/463 (46%), Positives = 279/463 (60%), Gaps = 14/463 (3%)

Query: 22  ELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQGKVIATEQGV 81
           ELTLDSR +R GD+FLA+PG KVDGR  I  AL +GA AV          G  +     V
Sbjct: 20  ELTLDSRNVRPGDLFLAVPGIKVDGRAHIADALKRGAAAVAYEV-----AGSTVLPITDV 74

Query: 82  QIYFYQ-LARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVTLLEGKAAVM 140
            +   + LA Q+SA+A  R+     +S+ +VG+TGTNGKTS +QL AQ + +L  +  ++
Sbjct: 75  PLIPVKGLAGQLSAIAG-RFYGDPSRSLNLVGVTGTNGKTSVTQLVAQALDVLGQRCGIV 133

Query: 141 GTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQGRVDAVPFDV 200
           GTLG G +G L    +TT D I +   L +    G    AMEVSSHGL QGR  A+ FDV
Sbjct: 134 GTLGTGFYGSLQSGRHTTPDPIAVQATLTDLRKAGARAVAMEVSSHGLDQGRATALAFDV 193

Query: 201 AVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLSELANVP--AK 258
           AV TNL+RDHLDYHG ME YA AK  LF +  L   ++NLDD  G     ELA V   ++
Sbjct: 194 AVLTNLSRDHLDYHGTMEAYAAAKAKLFAWSDLKCRVINLDDDFGR----ELAAVKQESR 249

Query: 259 MWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLLAALSALY 318
           +  +S +  +    Y ++A+F+D GV+ATLV P+GE  +RS LLG FNLSN+LAA+ AL 
Sbjct: 250 LITYS-QLDSSAYLYCRDAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSNVLAAVGALL 308

Query: 319 LQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALRRHCAGEL 378
                +  +   +P L    GRM+R   AD   +VVDYAHTPDA+E+ L ALR H  G L
Sbjct: 309 GLDYALDEILKALPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEALRPHAKGRL 368

Query: 379 WCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLTHPERALT 438
            C+FGCGGDRD+GKRPLM    E+ AD + VT DN RSE P  I  DI  G    ++   
Sbjct: 369 LCLFGCGGDRDRGKRPLMAGVVERLADGVWVTDDNPRSESPVSIFDDIRPGFVAADKVRF 428

Query: 439 EVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDE 481
              R  AI  ++A A   DV++LAGKGHE YQE  G R  + +
Sbjct: 429 IEGRGQAIAELIASANADDVVVLAGKGHEDYQEINGQRQPFSD 471