Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Sinorhizobium meliloti 1021

 Score =  241 bits (615), Expect = 4e-68
 Identities = 176/502 (35%), Positives = 248/502 (49%), Gaps = 37/502 (7%)

Query: 2   MLLRDLLAPWFP-----YAGEQTFLEL---TLDSRAIRRGDVFLALPGHKVDGRQFIDKA 53
           M + DL    FP       G+   +E+   T DSR ++ GD+F+A+ G K DG  +I  A
Sbjct: 1   MKITDLAGSNFPELSAQLKGDAATIEIGGITADSRQVKPGDLFVAVAGSKADGAAYIADA 60

Query: 54  LAQGATAVLVHTDKIDEQGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGI 113
           L++GA+AV+  T            E G  ++     R+  A AA  +   Q ++M  V +
Sbjct: 61  LSRGASAVVAGTGT--------PAEAGAPVFAISDPRRFLAKAASSFYGRQPETM--VAV 110

Query: 114 TGTNGKTSTSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFAD 173
           TGT GKTS +    Q+       AA++GT G    G       TT D ++L + L E AD
Sbjct: 111 TGTAGKTSVASFTRQIWAHSGFSAAMIGTTGVVAPGRTEYGSLTTPDPVSLHKLLAELAD 170

Query: 174 KGVNTCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSL 233
           +GV   AME SSHGL Q R+D V    A FTNL RDH+DYH  +E+Y  +K  LF   +L
Sbjct: 171 EGVTHAAMEASSHGLDQRRLDGVELAAAAFTNLGRDHMDYHPTVEHYMASKMRLF--GAL 228

Query: 234 LH----GLVNLDDPVGAAWLSELANVPAKMWGFSIEAHTEVAFYT--KNAQFNDQGVQAT 287
           L      ++  DD     W +E A   A+  G  +        +   K  +       A 
Sbjct: 229 LPKGSPAVIFADDQ----WSAE-AIAAARKAGHDVRTVGRNGDFIALKRVEHFRHKQSAE 283

Query: 288 LVWPEGEVDIRSPLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERF-TT 346
           +   +   +I  PL G F ++N L A       G+  +A  S +  L   +GR+E    T
Sbjct: 284 VHVGDDIYEIHVPLAGDFQIANALVAAGLAMSTGITAKAAFSALERLQGASGRLELVGQT 343

Query: 347 ADNITLVVDYAHTPDAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADR 406
            D     VDYAH PDA+   L ++R    G +  VFGCGGDRDKGKRP+MG+ A + AD 
Sbjct: 344 KDGALAYVDYAHKPDALANVLESVRPFTTGRVVVVFGCGGDRDKGKRPIMGEIASRLADV 403

Query: 407 IMVTSDNARSEDPNQIITDIIQGLTHPERALTEV-DRVAAIKHVVAQAKPGDVILLAGKG 465
           ++VT DN RSE P  I  +I+       +  TE+ DR  AI+  V   K GD +++AGKG
Sbjct: 404 VIVTDDNPRSEVPEVIRAEIMAA----AKGATEIGDRAEAIRAAVGMLKTGDTLIVAGKG 459

Query: 466 HETYQEAAGVRHDYDERALARQ 487
           HE  Q    V   + + A  R+
Sbjct: 460 HEEGQTVGSVTLPFSDHAEVRK 481