Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  573 bits (1478), Expect = e-168
 Identities = 299/492 (60%), Positives = 358/492 (72%), Gaps = 6/492 (1%)

Query: 1   MMLLRDLLAPWFPYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATA 60
           MMLL+DLLAPWF YAG ++     +DSR +  G +F+A+PG+K DGR ++D A A+GA A
Sbjct: 1   MMLLKDLLAPWFHYAGTESVHAPVIDSRQLTAGGLFIAVPGYKTDGRAYLDAAFAKGAAA 60

Query: 61  VLVHTDKIDEQGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKT 120
            LVHTD  DE GKV + E G+ I F+QL RQVSAVA   Y + +G+ + +VG+TGTNGKT
Sbjct: 61  ALVHTDDPDEHGKV-SYEPGLCIAFFQLNRQVSAVARQYYALTRGK-LRVVGVTGTNGKT 118

Query: 121 STSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCA 180
           S SQL AQL  LL  KAAVMGTLGNGLWG+L D GNTTADA+ +M  L++F  +G   CA
Sbjct: 119 SVSQLIAQLTELLGDKAAVMGTLGNGLWGQLQDVGNTTADAVRVMADLYDFEHQGAKVCA 178

Query: 181 MEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNL 240
           MEVSSHGLVQGRV+AVPF+VAVFTNL+RDHLDYHGDM+NYA AK+ LF F SL   ++NL
Sbjct: 179 MEVSSHGLVQGRVEAVPFEVAVFTNLSRDHLDYHGDMDNYAAAKRRLFAFGSLSARVINL 238

Query: 241 DDPVGAAWLSELANVPAKMWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSP 300
           DD VG  W   +        GFS   H +  +  +NA F+  G  A LVWP G+  +   
Sbjct: 239 DDKVGEQWFDGMGCAT----GFSCLGHAKADWRFENAHFHHAGFSANLVWPGGQKPLECR 294

Query: 301 LLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTP 360
           LLGAFNLSNLLAAL A+   G  +  L +    L  V GRME F   D ++LVVDYAHTP
Sbjct: 295 LLGAFNLSNLLAALCAMAQLGYQVPDLVAAAAKLEAVPGRMECFPRKDGVSLVVDYAHTP 354

Query: 361 DAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPN 420
           DAIEQAL A R HC G LW VFGCGGDRDKGKRPLM +AAE  AD +++TSDNARSEDP 
Sbjct: 355 DAIEQALKAARHHCEGALWIVFGCGGDRDKGKRPLMAEAAEAFADCLVLTSDNARSEDPA 414

Query: 421 QIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYD 480
            I+ D+  GL  PERAL  VDRVAAI+H V+ AKPGD+ILLAGKGHETYQE AGV+H+YD
Sbjct: 415 VILEDMKAGLDAPERALCMVDRVAAIRHAVSMAKPGDLILLAGKGHETYQEIAGVKHEYD 474

Query: 481 ERALARQLSEQS 492
           ERALAR LSE++
Sbjct: 475 ERALARVLSEEN 486