Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (663), Expect = 1e-73
 Identities = 184/470 (39%), Positives = 243/470 (51%), Gaps = 23/470 (4%)

Query: 23  LTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQGKVIATEQGVQ 82
           LT DSRA+  G +F ALPG K DGR FI  ALA GA+AVL        +G  +  +    
Sbjct: 33  LTADSRAVAPGWLFAALPGVKADGRAFIPAALAAGASAVLA------PEGTALPPDAPAA 86

Query: 83  IYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVTLLEGKAAVMGT 142
           +      RQ  A  A  +   Q  +  +V +TGTNGKTS+     Q+   L   AA +GT
Sbjct: 87  LVTAANPRQAFARMAAAFAGAQPAT--VVAVTGTNGKTSSVSFTRQIWDRLGRTAASLGT 144

Query: 143 LG--NGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQGRVDAVPFDV 200
           LG  +G++        TT D ++L + L E  + GV+  AME SSHGL Q R+D V    
Sbjct: 145 LGAESGVYRRA--GSMTTPDPVSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGVRLSA 202

Query: 201 AVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGL--VNLDDPVGAAWLSELANVPAK 258
           A FTNLTRDHLDYH  M+ Y  AK  LF       G+  +N DDP      +   +    
Sbjct: 203 AAFTNLTRDHLDYHHTMDAYLAAKARLFGEVLGREGVAVLNADDPAFPTLAALCRDRGQS 262

Query: 259 MWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLLAALSALY 318
           +  +   A T +     +A+ + Q +   L      V +  PL+G F   N+L AL    
Sbjct: 263 VLDYGRSAKT-LRLAGVSAKAHGQSLDLELFGRHHSVLL--PLVGDFQAMNVLCALGLAI 319

Query: 319 LQGMDMRALASKVPYLVPVAGRMERFTT-ADNITLVVDYAHTPDAIEQALNALRRHCAGE 377
             G  + A  + +  L  V GR+E     A    + VDYAHTPD +  AL ALR HC G+
Sbjct: 320 ATGAPVDAAVATLASLEGVPGRLEMVARRASGAPVYVDYAHTPDGLVTALRALRPHCRGK 379

Query: 378 LWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLTHPERAL 437
           L CVFGCGGDRD+ KRPLMG+A  + AD  ++T DN RSEDP  I  +   G        
Sbjct: 380 LVCVFGCGGDRDRAKRPLMGRAVAEGADVAILTDDNPRSEDPAAIRAEARVGCPD----A 435

Query: 438 TEVD-RVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDERALAR 486
            E+D R AAI+  VA   P D++++AGKGHET Q    V H + +   AR
Sbjct: 436 IEIDGRDAAIRAGVALLGPNDLLVIAGKGHETGQTIGTVVHPFVDADHAR 485