Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

 Score =  343 bits (881), Expect = 6e-99
 Identities = 212/483 (43%), Positives = 278/483 (57%), Gaps = 29/483 (6%)

Query: 26  DSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQGKVIATEQ----GV 81
           DSR ++ GDVF+A PGH  DGR FI  AL +GA  V              A  Q     +
Sbjct: 27  DSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDFAWNPAWAAVPQLGVDNL 86

Query: 82  QIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVTLLEGKAAVMG 141
           Q +   LA  V    +        + + +VG+TGTNGKT+ SQ  AQ +       AV+G
Sbjct: 87  QSFAGHLANLVYGRPS--------EQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVIG 138

Query: 142 TLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQGRVDAVPFDVA 201
           TLGNG    L ++ NTT DA+ L R L E+   G   CAMEVSS GL QGR     F VA
Sbjct: 139 TLGNGFPDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSVA 198

Query: 202 VFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLSELANVPAKMWG 261
           VFTNLTRDHLDYHG M  Y  AK+ LF +  L   ++NLDDP G   L++     +   G
Sbjct: 199 VFTNLTRDHLDYHGTMAAYGAAKERLFAWPELNEAVINLDDPFGRELLAQ--TTASLRIG 256

Query: 262 FSIEAH--TEVAFY--TKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLLAALSAL 317
           +++E    TE  +    +N +   +G+  TL+ P+G V + + L+G +N++NLLA   AL
Sbjct: 257 YTLEGRQATEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGAL 316

Query: 318 YLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALR---RHC 374
              G+ +  +  ++  L P AGRM+RF       +VVDYAH+PDA+E AL ALR   +  
Sbjct: 317 LALGLPLETVGQRLCRLTPPAGRMQRFGGKGLPLVVVDYAHSPDALENALTALREVTQAR 376

Query: 375 AGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLTHPE 434
            G L CVFGCGGDRDKGKRPLMG  A + AD +++TSDN RSEDP  I+ +I  G   PE
Sbjct: 377 GGRLHCVFGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAGA--PE 434

Query: 435 RALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAG----VRHDY-DERALARQLS 489
            AL E +R  A+ H V +A   DV+L+AGKGHE YQE  G    VR  Y D  A+AR L 
Sbjct: 435 AAL-EAEREVAVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARALQ 493

Query: 490 EQS 492
           +++
Sbjct: 494 QRA 496